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SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00254
Bact-VirSR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00254
Identity
- Kingdom:
- phage
Quality
64.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-51
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2odkA00 | 3.40.1620.10 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › YefM-like domain | 0.74 | 53.0 | 5.15e-01 | 79.5% | 74.0% |
| 2j9lF01 | 3.90.1280.20 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › | 0.63 | 42.0 | 3.70e-01 | 70.5% | 45.2% |
| 2o16B00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.62 | 46.0 | 3.31e-01 | 81.8% | 26.7% |
| 2d4zA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.59 | 41.0 | 2.82e-01 | 70.5% | 19.5% |
| 3fhmA00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.56 | 43.0 | 3.08e-01 | 81.8% | 27.2% |
| 7xnzA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.56 | 39.0 | 2.94e-01 | 81.8% | 26.4% |
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 37.0 | 2.75e-01 | 70.5% | 72.8% |
| 3wknF00 | 6.20.50.120 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.55 | 37.0 | 3.72e-01 | 72.7% | 80.4% |
| 3fnaB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 40.0 | 3.03e-01 | 81.8% | 30.1% |
| 4nocD00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 40.0 | 2.92e-01 | 88.6% | 52.1% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.51 | 39.0 | 3.00e-01 | 97.7% | 59.3% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3954312 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.91 | 63.0 | 6.61e-01 | 72.7% | 80.0% |
| 3956773 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.88 | 63.0 | 5.06e-01 | 75.0% | 41.2% |
| 4169084 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.84 | 55.0 | 4.69e-01 | 72.7% | 42.9% |
| 3955595 | 4267.1.1.1 ↗ | a+b duplicates or obligate multimers › YefM-like › YefM-like › YefM-like › PhdYeFM_antitox | 0.80 | 60.0 | 5.59e-01 | 81.8% | 69.1% |
| 5032861 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.58 | 40.0 | 2.97e-01 | 75.0% | 75.4% |
| 4945581 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 40.0 | 2.84e-01 | 86.4% | 22.6% |
| 1179574 | 223.3.1.1 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.51 | 34.0 | 2.84e-01 | 70.5% | 39.8% |
| 3782906 | 101.1.2.311 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA12 | 0.51 | 36.0 | 2.78e-01 | 75.0% | 45.5% |