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SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00508

Bact-Vir

SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00508

Identity

Kingdom:
phage

Quality

90.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-83
PDB
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 42.0 4.12e-01 74.1% 67.4%
2k50A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 39.0 3.59e-01 72.8% 51.9%
2cqaA01 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.58 38.0 3.93e-01 72.8% 71.6%
2ia7A00 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 42.0 3.82e-01 76.5% 86.5%
4hh3A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 39.0 3.50e-01 70.4% 89.5%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.57 43.0 3.64e-01 80.2% 72.9%
1f9cA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 40.0 3.53e-01 74.1% 55.7%
3j7aV00 2.40.50.1000 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 3.28e-01 72.8% 74.0%
2bhvB01 2.40.128.260 Mainly Beta › Beta Barrel › Lipocalin › Type IV secretion system, VirB10/TraB/TrbI 0.56 42.0 3.35e-01 79.0% 64.6%
1qwdB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 42.0 3.46e-01 84.0% 93.4%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 38.0 3.36e-01 71.6% 75.2%
1fmbA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.55 36.0 3.37e-01 77.8% 51.9%
1jhnA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 39.0 2.86e-01 75.3% 53.4%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.55 45.0 3.79e-01 98.8% 52.5%
1ihjA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.55 38.0 3.69e-01 74.1% 80.9%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.54 42.0 3.26e-01 82.7% 80.8%
1s1dA00 2.120.10.100 Mainly Beta › 6 Propeller › Neuraminidase › Apyrase 0.54 41.0 2.85e-01 86.4% 92.1%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 37.0 4.13e-01 81.5% 95.2%
2uytA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 36.0 2.61e-01 70.4% 31.5%
2nlkA02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 37.0 2.71e-01 75.3% 60.4%
3hk4A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 38.0 3.43e-01 80.2% 82.2%
4j3vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 37.0 3.42e-01 75.3% 94.3%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.52 33.0 3.69e-01 82.7% 92.9%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 36.0 3.31e-01 74.1% 89.1%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 44.0 3.74e-01 100.0% 93.7%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.51 33.0 2.51e-01 88.9% 28.3%
6euaA01 3.90.215.10 Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 0.51 30.0 2.48e-01 90.1% 33.8%
3dm8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 37.0 3.24e-01 80.2% 77.8%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 35.0 3.61e-01 85.2% 80.6%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.21e-01 88.9% 55.7%
3cyjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.50 35.0 3.13e-01 74.1% 56.6%
2l73A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 35.0 2.93e-01 72.8% 69.9%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4015435 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.77 49.0 4.66e-01 72.8% 55.8%
3670182 2.1.1.1 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 0.72 47.0 4.04e-01 76.5% 43.2%
4599318 2.1.1.299 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S12 0.72 42.0 4.32e-01 72.8% 60.0%
3326221 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 48.0 4.53e-01 74.1% 74.7%
3307397 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 47.0 3.95e-01 74.1% 50.7%
3268888 2.1.1.44 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 0.66 43.0 4.23e-01 72.8% 61.1%
3489971 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 53.0 4.64e-01 87.7% 71.7%
4929323 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 51.0 4.59e-01 86.4% 97.3%
3212189 214.1.1.0 a+b two layers › SH2 › SH2 › SH2 0.62 43.0 3.81e-01 71.6% 73.0%
3760087 883.1.1.1 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP 0.61 45.0 3.35e-01 77.8% 84.9%
5082785 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 42.0 4.28e-01 80.2% 73.8%
3670792 243.3.1.67 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Phytochelatin_C 0.60 41.0 4.55e-01 71.6% 92.3%
3531937 2484.1.1.317 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF28925 0.60 51.0 3.16e-01 95.1% 78.8%
5014254 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 38.0 4.23e-01 71.6% 85.0%
4929844 2.1.1.135 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.60 43.0 4.16e-01 74.1% 77.8%
3412961 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 51.0 3.23e-01 95.1% 76.9%
3799692 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.59 50.0 3.08e-01 95.1% 79.7%
4937519 2.1.1.135 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 0.58 41.0 3.65e-01 74.1% 58.3%
3181024 719.1.1.2 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.58 40.0 3.45e-01 71.6% 86.2%
4661118 218.1.1.2 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.57 39.0 3.39e-01 70.4% 63.2%
3251342 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.56 38.0 3.36e-01 70.4% 70.0%
3933012 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 44.0 2.73e-01 87.7% 82.7%
3526186 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.55 47.0 2.93e-01 95.1% 76.8%
3223921 2484.1.1.259 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 0.55 42.0 4.15e-01 84.0% 94.4%
5071482 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.55 44.0 3.86e-01 88.9% 82.4%
None 0.54 42.0 2.58e-01 84.0% 26.6%
3864913 218.1.1.2 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.54 37.0 3.07e-01 71.6% 55.5%
3497046 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 44.0 3.95e-01 93.8% 63.5%
5037441 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 38.0 3.50e-01 75.3% 81.8%
3972408 2.1.1.140 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SURF1 0.53 41.0 3.38e-01 85.2% 66.3%
3315008 5.1.4.151 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BCAS3_WD40 0.53 41.0 2.54e-01 84.0% 35.1%
3815495 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.53 35.0 3.71e-01 86.4% 77.1%
4967706 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.53 42.0 3.60e-01 86.4% 91.0%
3451654 5.1.4.151 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BCAS3_WD40 0.52 42.0 2.54e-01 86.4% 34.6%
4153975 7504.1.1.2 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T 0.52 41.0 3.17e-01 85.2% 84.7%
None 0.52 41.0 2.46e-01 84.0% 35.7%
3615785 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 45.0 2.66e-01 100.0% 16.8%
3930546 5.1.4.90 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 0.51 45.0 2.95e-01 100.0% 29.9%
1108449 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.51 33.0 2.51e-01 88.9% 28.3%
3445964 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 41.0 2.92e-01 90.1% 34.0%
135165 243.1.1.36 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_5 0.51 37.0 3.37e-01 80.2% 82.1%
3744711 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.51 31.0 2.46e-01 72.8% 28.9%
D2 high residues 110-164
PDB
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.89 80.0 7.20e-01 98.2% 73.6%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.89 79.0 7.18e-01 98.2% 74.6%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.86 78.0 6.35e-01 100.0% 71.7%
1m9sA04 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.84 73.0 6.23e-01 96.4% 84.9%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.83 70.0 6.60e-01 96.4% 76.9%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.82 69.0 6.48e-01 100.0% 77.3%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 70.0 6.50e-01 100.0% 76.5%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.81 74.0 4.73e-01 100.0% 33.3%
3urgA02 2.30.30.530 Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain 0.81 71.0 6.75e-01 96.4% 93.7%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 73.0 5.89e-01 100.0% 55.0%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 66.0 6.66e-01 90.9% 98.1%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.80 73.0 5.23e-01 100.0% 53.4%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 70.0 6.78e-01 100.0% 87.1%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 64.0 5.35e-01 94.5% 53.3%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.79 71.0 5.09e-01 100.0% 53.6%
5z8lA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.79 72.0 5.49e-01 100.0% 69.7%
4ft4B01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.78 71.0 5.08e-01 100.0% 58.7%
6vilA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.78 70.0 5.09e-01 100.0% 57.2%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 5.99e-01 96.4% 76.3%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 6.46e-01 98.2% 88.1%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.77 70.0 5.07e-01 100.0% 58.6%
1whlA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.77 69.0 5.73e-01 100.0% 85.3%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 66.0 6.40e-01 94.5% 90.3%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 64.0 6.67e-01 90.9% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 64.0 6.11e-01 100.0% 78.1%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 62.0 6.29e-01 98.2% 92.5%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 68.0 6.23e-01 100.0% 86.1%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 64.0 6.23e-01 94.5% 98.3%
4epcA02 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.76 64.0 5.88e-01 94.5% 95.8%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 66.0 6.09e-01 100.0% 93.1%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 65.0 6.54e-01 100.0% 94.6%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.74 67.0 6.04e-01 100.0% 83.8%
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 6.26e-01 98.2% 88.3%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 5.80e-01 100.0% 91.8%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 5.97e-01 96.4% 83.9%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 65.0 6.03e-01 100.0% 81.4%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 4.62e-01 100.0% 45.0%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.72 50.0 4.66e-01 70.9% 74.6%
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 60.0 5.02e-01 96.4% 80.8%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.72 64.0 5.80e-01 98.2% 75.3%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.71 62.0 5.01e-01 100.0% 56.0%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.71 62.0 5.92e-01 100.0% 83.1%
2mk5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 60.0 4.57e-01 96.4% 64.1%
2akkA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 59.0 5.44e-01 100.0% 82.4%
1m4zA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.69 59.0 4.12e-01 100.0% 52.0%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.69 59.0 5.41e-01 100.0% 93.4%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 5.42e-01 100.0% 77.9%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 49.0 4.65e-01 76.4% 78.8%
1sp4B00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.69 59.0 4.03e-01 100.0% 44.4%
1uirA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.67 50.0 5.19e-01 83.6% 92.3%
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.22e-01 92.7% 87.3%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.66 52.0 5.20e-01 87.3% 89.3%
1inlC02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.66 51.0 4.95e-01 87.3% 78.1%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 56.0 3.28e-01 96.4% 16.8%
2cmgA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.64 49.0 5.09e-01 83.6% 94.1%
1iy9A02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.64 49.0 5.06e-01 85.5% 92.3%
5cbeE00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 45.0 4.38e-01 76.4% 79.7%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 49.0 5.14e-01 85.5% 91.8%
5b4wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 51.0 3.05e-01 94.5% 21.2%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 50.0 5.04e-01 96.4% 92.9%
7ob9B01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.61 50.0 3.48e-01 92.7% 28.1%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 50.0 4.97e-01 94.5% 89.8%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.61 51.0 4.91e-01 96.4% 90.6%
3o4fC01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.60 47.0 4.87e-01 87.3% 96.1%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 49.0 3.02e-01 92.7% 24.8%
2xg5A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 46.0 3.85e-01 81.8% 93.5%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 50.0 4.11e-01 94.5% 84.9%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 47.0 4.72e-01 92.7% 86.2%
1gqyB02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.59 44.0 2.99e-01 80.0% 77.0%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 53.0 3.75e-01 100.0% 44.6%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 50.0 3.99e-01 100.0% 100.0%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.59 49.0 4.50e-01 100.0% 77.9%
4i79A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 49.0 3.07e-01 94.5% 23.7%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.58 52.0 4.75e-01 98.2% 83.1%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 51.0 4.33e-01 100.0% 69.2%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 48.0 3.08e-01 96.4% 26.1%
4a2lF02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 2.96e-01 96.4% 20.7%
3nixB00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 50.0 2.99e-01 100.0% 38.2%
1rl1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 39.0 3.38e-01 74.5% 80.4%
1xdiA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 47.0 3.22e-01 100.0% 64.2%
2lojA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.54 37.0 4.11e-01 87.3% 100.0%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.54 45.0 3.64e-01 100.0% 79.7%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.40e-01 92.7% 67.2%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.44e-01 96.4% 75.4%
5iroD00 2.60.40.3530 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.54e-01 92.7% 66.7%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.50 38.0 3.63e-01 90.9% 75.7%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 42.0 3.51e-01 100.0% 74.1%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4241924 4.1.1.93 beta barrels › SH3 › SH3 › SH3 › 40S_S4_C 0.94 80.0 6.65e-01 94.5% 55.6%
3174977 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.93 76.0 6.19e-01 96.4% 50.5%
4629735 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 81.0 7.62e-01 94.5% 80.0%
5026824 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 82.0 7.45e-01 100.0% 75.7%
4300449 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.91 82.0 7.70e-01 96.4% 81.5%
5022848 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.89 78.0 7.57e-01 92.7% 85.0%
5075469 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.89 81.0 7.62e-01 98.2% 83.1%
4593997 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.89 79.0 7.37e-01 94.5% 80.0%
4354770 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.87 79.0 7.24e-01 100.0% 77.1%
4943273 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 80.0 7.51e-01 100.0% 84.6%
4971532 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 80.0 7.29e-01 100.0% 78.6%
1117666 4.1.1.103 beta barrels › SH3 › SH3 › SH3 › SH3_12 0.85 77.0 6.59e-01 100.0% 83.5%
5034724 4.1.1.482 beta barrels › SH3 › SH3 › SH3 › DUF4314 0.84 70.0 7.04e-01 90.9% 100.0%
3486496 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 75.0 7.52e-01 100.0% 96.4%
4071917 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.83 67.0 6.96e-01 98.2% 96.0%
5071741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 68.0 6.60e-01 94.5% 81.7%
4960540 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 74.0 7.03e-01 100.0% 96.9%
5052257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 67.0 6.53e-01 96.4% 81.7%
3917372 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.81 72.0 6.48e-01 100.0% 72.0%
2727964 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.81 70.0 6.90e-01 100.0% 89.8%
4002655 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 72.0 5.31e-01 100.0% 64.3%
3385654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 70.0 5.43e-01 98.2% 68.3%
4284709 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.80 66.0 6.64e-01 96.4% 89.1%
4118552 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.80 71.0 6.43e-01 100.0% 86.7%
3661142 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.80 72.0 5.01e-01 100.0% 47.1%
3475462 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.80 73.0 6.21e-01 100.0% 65.9%
3702154 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 74.0 6.56e-01 100.0% 73.3%
3855038 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.80 69.0 4.91e-01 100.0% 33.1%
4161673 4.1.1.105 beta barrels › SH3 › SH3 › SH3 › DUF5604 0.79 69.0 5.93e-01 100.0% 62.4%
4120629 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.79 71.0 6.37e-01 100.0% 85.3%
3699995 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 72.0 6.59e-01 100.0% 88.6%
4427477 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 71.0 5.88e-01 100.0% 62.1%
5063311 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.79 60.0 6.49e-01 90.9% 100.0%
3901117 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.79 70.0 4.79e-01 98.2% 32.8%
3594413 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.79 71.0 6.25e-01 100.0% 91.3%
3793311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 6.47e-01 94.5% 100.0%
3742938 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.78 66.0 6.23e-01 92.7% 81.5%
3738641 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.78 70.0 6.28e-01 100.0% 76.0%
3277860 4.1.1.368 beta barrels › SH3 › SH3 › SH3 › DUF3097_N 0.77 67.0 6.37e-01 100.0% 81.5%
147797 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.77 67.0 6.22e-01 96.4% 85.3%
3876680 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.77 70.0 5.66e-01 100.0% 60.0%
2427475 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 67.0 6.25e-01 100.0% 77.6%
3730229 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.77 70.0 6.28e-01 100.0% 76.0%
4358168 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 68.0 5.42e-01 100.0% 64.5%
3289944 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.77 68.0 5.78e-01 100.0% 70.0%
3780847 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.77 70.0 5.00e-01 100.0% 69.3%
3812766 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.77 68.0 6.31e-01 100.0% 92.9%
3947700 4.8.1.25 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DSRB 0.77 67.0 6.46e-01 98.2% 95.2%
3715285 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.76 68.0 4.90e-01 100.0% 43.2%
5032454 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.76 67.0 5.11e-01 100.0% 54.6%
4422252 4.1.1.455 beta barrels › SH3 › SH3 › SH3 › DSRB 0.76 67.0 6.57e-01 98.2% 100.0%
3475240 4.1.1.304 beta barrels › SH3 › SH3 › SH3 › SH3-C_UBE2O 0.76 68.0 6.85e-01 98.2% 98.2%
3936885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 68.0 6.45e-01 98.2% 87.7%
4956630 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.76 67.0 4.83e-01 100.0% 39.4%
4616207 4.1.1.448 beta barrels › SH3 › SH3 › SH3 › DUF5372 0.76 62.0 6.42e-01 89.1% 98.0%
3344796 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 67.0 5.85e-01 100.0% 68.7%
3918299 4.1.1.376 beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.75 65.0 6.04e-01 96.4% 81.4%
4966163 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 66.0 5.93e-01 100.0% 72.0%
4565130 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 66.0 5.50e-01 100.0% 61.1%
4300895 4.11.1.6 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › PF31032 0.75 66.0 4.91e-01 100.0% 48.6%
3619619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 67.0 6.20e-01 100.0% 82.9%
4031510 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.54e-01 100.0% 72.2%
3519122 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.74 64.0 5.49e-01 100.0% 71.1%
3740221 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.74 65.0 4.66e-01 100.0% 41.2%
3497365 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 66.0 6.60e-01 98.2% 100.0%
3793656 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.74 65.0 4.77e-01 100.0% 37.9%
3581336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.19e-01 100.0% 60.0%
3514556 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 66.0 6.10e-01 100.0% 81.4%
3575865 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.73 65.0 6.01e-01 100.0% 81.4%
3166879 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.73 66.0 6.22e-01 100.0% 95.4%
3880508 4.1.1.129 beta barrels › SH3 › SH3 › SH3 › Tudor_5 0.72 64.0 5.32e-01 100.0% 63.2%
4041376 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.72 63.0 5.57e-01 100.0% 83.7%
3687350 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 58.0 5.86e-01 92.7% 89.1%
4505316 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 63.0 6.16e-01 100.0% 95.0%
4195627 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.71 64.0 6.05e-01 98.2% 87.7%
3928430 4.1.1.223 beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.71 64.0 5.93e-01 100.0% 87.1%
5015352 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.51e-01 100.0% 72.3%
4537528 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.83e-01 100.0% 95.7%
3737837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.88e-01 98.2% 96.9%
4206684 4.6.1.6 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM 0.70 64.0 6.05e-01 100.0% 93.8%
4186983 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.70 64.0 5.74e-01 100.0% 81.3%
4072405 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.70 63.0 5.69e-01 100.0% 81.3%
4224041 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.70 63.0 5.67e-01 100.0% 86.7%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.70 61.0 5.56e-01 100.0% 80.0%
4998113 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.70 53.0 5.65e-01 92.7% 100.0%
3448975 4.1.1.66 beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.69 61.0 5.78e-01 98.2% 92.3%
4165211 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.69 51.0 3.72e-01 78.2% 43.4%
5055172 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.68 55.0 5.54e-01 89.1% 90.9%
3737927 220.1.1.294 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 0.68 62.0 4.87e-01 100.0% 73.6%
3301015 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 61.0 5.75e-01 100.0% 95.4%
3636503 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 61.0 5.63e-01 100.0% 92.9%
3930643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 59.0 5.79e-01 100.0% 93.3%
3967111 3338.2.1.2 a+b two layers › Fragilysin-3 prodomain-like › Type II secretion chaperone CpaB › Type II secretion chaperone CpaB › BamI_lipocalin 0.67 57.0 4.38e-01 96.4% 47.2%
4426276 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.38e-01 98.2% 91.4%
4068291 3699.1.1.1 beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N 0.66 53.0 5.17e-01 90.9% 85.0%
5075523 2003.1.5.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.65 52.0 3.31e-01 90.9% 17.6%
3260945 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 53.0 5.23e-01 94.5% 91.7%
3928729 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.63 54.0 3.54e-01 92.7% 26.3%