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SR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00583
Bact-VirSR-VP_0-2_scaffold_141_2071242_prodigal-single.1__X__X__00583
Identity
- Kingdom:
- phage
Quality
90.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-64
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nutA02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.55 | 33.0 | 3.22e-01 | 100.0% | 47.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3432956 | 376.1.1.93 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SIP5_N | 0.63 | 35.0 | 3.02e-01 | 100.0% | 31.3% |
| 4335812 | 708.1.2.10 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 | 0.57 | 40.0 | 3.31e-01 | 77.4% | 78.2% |
| 3716795 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.57 | 33.0 | 3.63e-01 | 98.1% | 77.1% |
| 4946657 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.55 | 33.0 | 3.10e-01 | 100.0% | 43.1% |
| 3316651 | 4224.1.1.1 ↗ | few secondary structure elements › CHY zinc finger › CHY zinc finger › CHY zinc finger › zf-CHY | 0.55 | 39.0 | 3.25e-01 | 77.4% | 51.0% |
| 3211971 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.54 | 32.0 | 3.43e-01 | 98.1% | 67.5% |
| 4976152 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.53 | 42.0 | 3.26e-01 | 100.0% | 57.4% |
| 4475754 | 4076.2.1.5 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MRNIP | 0.53 | 43.0 | 4.12e-01 | 100.0% | 83.1% |
| 4263982 | 375.1.1.302 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MRNIP | 0.52 | 43.0 | 4.27e-01 | 100.0% | 98.2% |
| 3217099 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.51 | 44.0 | 2.82e-01 | 100.0% | 31.4% |