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SR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00042
Bact-VirSR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00042
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 174-183_303-389
Domain cluster:
rep: MG711460.1__AUV61548.1__X__00036__D86-183
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qi3A00 | 2.60.40.1210 | Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain | 0.58 | 46.0 | 3.69e-01 | 88.7% | 96.1% |
| 3dsmA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 40.0 | 2.80e-01 | 72.2% | 99.1% |
| 3fvqA03 | 2.40.50.470 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 28.0 | 3.37e-01 | 79.4% | 77.6% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 31.0 | 3.57e-01 | 81.4% | 84.4% |
| 1g0dA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 4.04e-01 | 88.7% | 99.1% |
| 6mw4A01 | 2.60.120.1290 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 37.0 | 3.38e-01 | 74.2% | 76.2% |
| 3hlkA01 | 2.60.40.2240 | Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain | 0.52 | 42.0 | 3.78e-01 | 89.7% | 95.6% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.52e-01 | 99.0% | 67.6% |
| 3actA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.51 | 42.0 | 3.09e-01 | 93.8% | 77.0% |
| 1j0hA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 41.0 | 3.78e-01 | 89.7% | 95.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1501289 | 3943.1.1.4 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › FlgK_2nd | 0.67 | 59.0 | 5.52e-01 | 96.9% | 98.3% |
| 4086268 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.59 | 37.0 | 3.80e-01 | 93.8% | 65.6% |
| 4444537 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.59 | 35.0 | 3.41e-01 | 81.4% | 51.4% |
| 4451633 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.57 | 35.0 | 3.20e-01 | 81.4% | 43.8% |
| 5043373 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.56 | 36.0 | 3.43e-01 | 82.5% | 53.3% |
| 3227979 | 2.1.1.126 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF272 | 0.55 | 31.0 | 3.20e-01 | 78.4% | 55.6% |
| 3076037 | 210.1.2.2 ↗ | a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain › CBAH | 0.54 | 40.0 | 2.86e-01 | 78.4% | 87.7% |
| 5043146 | 3386.1.1.0 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related | 0.54 | 38.0 | 3.87e-01 | 96.9% | 74.7% |
| 3947044 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 31.0 | 3.37e-01 | 76.3% | 70.7% |
| 4054973 | 11.1.1.14 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 | 0.52 | 42.0 | 4.00e-01 | 87.6% | 100.0% |
| 5065013 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.52 | 34.0 | 2.95e-01 | 92.8% | 39.4% |
| 4954879 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.52 | 42.0 | 3.92e-01 | 88.7% | 91.7% |
| 3680131 | 844.1.1.2 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR | 0.51 | 39.0 | 3.05e-01 | 81.4% | 92.2% |
| 3923531 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.51 | 37.0 | 2.89e-01 | 76.3% | 94.5% |
| 4981611 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.51 | 33.0 | 3.02e-01 | 74.2% | 49.2% |
D2
high
residues 191-298
Domain cluster:
rep: MG711460.1__AUV61548.1__X__00036__D86-183
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 30.0 | 3.97e-01 | 78.7% | 87.5% |
| 2ccvA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 33.0 | 3.46e-01 | 75.0% | 55.6% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.57 | 39.0 | 3.23e-01 | 71.3% | 91.0% |
| 3g7gH00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.57 | 42.0 | 3.76e-01 | 77.8% | 91.4% |
| 2qqpA03 | 2.60.40.4260 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 42.0 | 3.88e-01 | 77.8% | 72.3% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 36.0 | 3.75e-01 | 80.6% | 70.7% |
| 4g1lA01 | 2.70.20.50 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, N-terminal domain | 0.55 | 49.0 | 4.32e-01 | 100.0% | 76.1% |
| 3mh9A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.54 | 37.0 | 3.12e-01 | 71.3% | 88.8% |
| 2jpeA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.54 | 40.0 | 3.81e-01 | 79.6% | 87.9% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 38.0 | 3.54e-01 | 75.9% | 98.5% |
| 3fruA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 42.0 | 3.64e-01 | 90.7% | 84.7% |
| 2o4vA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.50 | 42.0 | 2.93e-01 | 95.4% | 57.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3610459 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.63 | 46.0 | 4.46e-01 | 76.9% | 100.0% |
| 3973121 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.62 | 37.0 | 3.49e-01 | 85.2% | 48.4% |
| 4309833 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.61 | 36.0 | 3.47e-01 | 85.2% | 48.4% |
| 4945674 | 2.1.1.252 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2_C | 0.60 | 34.0 | 4.03e-01 | 79.6% | 82.9% |
| 4337720 | 3454.1.1.2 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › T2SSC | 0.60 | 36.0 | 4.39e-01 | 95.4% | 98.5% |
| 4311691 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.60 | 34.0 | 3.18e-01 | 85.2% | 43.7% |
| 4236900 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.57 | 34.0 | 3.24e-01 | 97.2% | 48.1% |
| 3706810 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.57 | 43.0 | 4.07e-01 | 80.6% | 97.7% |
| 2099169 | 6176.1.1.1 ↗ | beta sandwiches › Insertion domain in tetravirus coat protein › Insertion domain in tetravirus coat protein › Insertion domain in tetravirus coat protein › Peptidase_A21 | 0.56 | 42.0 | 3.87e-01 | 77.8% | 71.7% |
| 3712674 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 4.01e-01 | 80.6% | 97.7% |
| 3437841 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.54 | 39.0 | 2.72e-01 | 75.9% | 21.9% |
| 3707303 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.54 | 45.0 | 3.01e-01 | 92.6% | 31.9% |
| 3889588 | 233.1.1.1 ↗ | a+b two layers › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC antigen-recognition domain › MHC_I | 0.51 | 42.0 | 3.61e-01 | 90.7% | 88.0% |
D3
high
residues 604-709
Domain cluster:
rep: BML_09012016_9m_scaffold_2_prodigal-single.1__X__X__00049__D1067-1159
D4
high
residues 847-914
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.67 | 52.0 | 4.21e-01 | 85.3% | 46.7% |
| 1josA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.66 | 47.0 | 4.13e-01 | 85.3% | 51.0% |
| 1b7yB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.64 | 44.0 | 4.16e-01 | 98.5% | 58.1% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 50.0 | 4.22e-01 | 85.3% | 73.2% |
| 5k8mA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 53.0 | 4.35e-01 | 98.5% | 67.2% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.62 | 41.0 | 3.70e-01 | 94.1% | 49.0% |
| 3w3sA01 | 3.30.70.1920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 46.0 | 3.57e-01 | 97.1% | 33.9% |
| 1ivzA00 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.59 | 49.0 | 4.09e-01 | 98.5% | 52.3% |
| 2pziB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 41.0 | 3.35e-01 | 98.5% | 35.9% |
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 49.0 | 3.75e-01 | 95.6% | 76.1% |
| 2wcrB00 | 3.10.129.140 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Helicobacter TNF-alpha-Inducing protein | 0.56 | 49.0 | 3.90e-01 | 100.0% | 84.9% |
| 3bf4A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 44.0 | 3.93e-01 | 98.5% | 60.6% |
| 5kf6A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.55 | 47.0 | 3.22e-01 | 97.1% | 77.6% |
| 5usrA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 40.0 | 3.42e-01 | 100.0% | 47.4% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.54 | 37.0 | 3.05e-01 | 100.0% | 35.7% |
| 2xglA00 | 3.10.450.300 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein | 0.54 | 44.0 | 4.12e-01 | 97.1% | 81.3% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 47.0 | 4.13e-01 | 98.5% | 69.2% |
| 2cc6A00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.54 | 44.0 | 4.51e-01 | 98.5% | 93.8% |
| 3iv6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 46.0 | 3.38e-01 | 100.0% | 49.5% |
| 1jkmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 2.90e-01 | 100.0% | 58.7% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 36.0 | 3.32e-01 | 98.5% | 51.5% |
| 1bwvA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.51 | 42.0 | 3.46e-01 | 94.1% | 49.2% |
| 3m1cA01 | 3.10.360.40 | Alpha Beta › Roll › Antimicrobial Peptide, Beta-defensin 2; Chain A › | 0.51 | 31.0 | 3.36e-01 | 100.0% | 76.9% |
| 2liyA00 | 2.20.25.390 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Stomagen | 0.50 | 32.0 | 3.58e-01 | 82.4% | 97.8% |
| 4bhqA00 | 3.30.70.2830 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 44.0 | 3.79e-01 | 100.0% | 81.7% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4561249 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.68 | 51.0 | 4.26e-01 | 85.3% | 45.8% |
| 4444422 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 52.0 | 4.24e-01 | 83.8% | 56.9% |
| 3397305 | 5001.1.1.5 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 | 0.65 | 56.0 | 3.75e-01 | 100.0% | 46.2% |
| 3214818 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.65 | 56.0 | 3.45e-01 | 94.1% | 19.2% |
| 3933064 | 3382.1.1.1 ↗ | alpha arrays › Protein Wnt-8 › Protein Wnt-8 › Protein Wnt-8 › wnt | 0.65 | 48.0 | 3.09e-01 | 77.9% | 35.3% |
| 3385861 | 3747.1.1.2 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C | 0.64 | 49.0 | 3.99e-01 | 85.3% | 44.2% |
| 3542147 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.63 | 43.0 | 3.40e-01 | 100.0% | 34.3% |
| 3384464 | 304.127.1.0 ↗ | a+b two layers › Alpha-beta plaits › Notch heterodimerization domain › Notch heterodimerization domain | 0.62 | 51.0 | 4.24e-01 | 94.1% | 53.1% |
| 4286263 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 53.0 | 4.39e-01 | 98.5% | 67.7% |
| 3313182 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.62 | 44.0 | 4.37e-01 | 80.9% | 72.9% |
| 5015002 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 49.0 | 3.94e-01 | 85.3% | 71.5% |
| 4322730 | 304.4.1.14 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dabb | 0.62 | 47.0 | 4.01e-01 | 92.6% | 49.6% |
| 3609303 | 1189.1.1.0 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor | 0.62 | 53.0 | 3.56e-01 | 98.5% | 94.0% |
| 4530628 | 859.1.1.4 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › ATG13 | 0.61 | 48.0 | 3.21e-01 | 85.3% | 95.6% |
| 4878600 | 327.13.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF_C | 0.61 | 46.0 | 3.69e-01 | 82.4% | 94.2% |
| 3343879 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 52.0 | 4.29e-01 | 98.5% | 56.2% |
| 5052991 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.60 | 53.0 | 3.70e-01 | 100.0% | 84.9% |
| 4028502 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.60 | 50.0 | 4.21e-01 | 94.1% | 67.5% |
| 3901459 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 51.0 | 2.97e-01 | 100.0% | 22.6% |
| 3595752 | 4001.1.1.4 ↗ | a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB | 0.59 | 46.0 | 3.76e-01 | 85.3% | 66.2% |
| 3577806 | 304.114.1.2 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain › POL3_N | 0.59 | 50.0 | 4.19e-01 | 97.1% | 60.0% |
| 4998601 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.58 | 49.0 | 3.99e-01 | 100.0% | 68.6% |
| 3206356 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.58 | 45.0 | 2.79e-01 | 85.3% | 17.0% |
| 4562582 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.57 | 46.0 | 3.70e-01 | 94.1% | 57.3% |
| 3905320 | 304.166.1.10 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › PF29951 | 0.57 | 50.0 | 4.19e-01 | 100.0% | 72.5% |
| 4481559 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.57 | 46.0 | 3.85e-01 | 92.6% | 58.5% |
| 3385473 | 3747.1.1.2 ↗ | a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C | 0.56 | 44.0 | 3.78e-01 | 85.3% | 63.6% |
| 3804236 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 40.0 | 3.24e-01 | 85.3% | 39.3% |
| 3699604 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.54 | 45.0 | 3.69e-01 | 94.1% | 57.8% |
| 3390019 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.54 | 41.0 | 3.61e-01 | 86.8% | 71.8% |
| 3807906 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.54 | 45.0 | 3.24e-01 | 97.1% | 38.6% |
| 3717221 | 2492.1.1.6 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › A_deamin | 0.53 | 44.0 | 2.77e-01 | 92.6% | 91.5% |
| 3177677 | 304.9.1.6 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 | 0.53 | 41.0 | 3.49e-01 | 83.8% | 77.3% |
| 3722381 | 109.2.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid | 0.51 | 44.0 | 2.77e-01 | 100.0% | 32.3% |
| 3672794 | 207.1.1.67 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_4,LRR_6 | 0.50 | 38.0 | 2.36e-01 | 88.2% | 38.9% |
D5
medium
residues 25-37_487-600
Domain cluster:
rep: KT624200.1__AMM44842.1__SP15_043__00044__D22-84_198-292
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3brsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.73 | 53.0 | 5.28e-01 | 100.0% | 71.6% |
| 1eucB03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.71 | 53.0 | 5.03e-01 | 99.2% | 67.1% |
| 3h5tA03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 61.0 | 5.69e-01 | 100.0% | 75.2% |
| 1peaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 52.0 | 4.68e-01 | 100.0% | 55.7% |
| 3om0A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 53.0 | 4.47e-01 | 100.0% | 47.8% |
| 3ctpA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.70 | 52.0 | 5.05e-01 | 100.0% | 71.0% |
| 6ecpB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.69 | 49.0 | 4.73e-01 | 99.2% | 64.1% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 47.0 | 4.34e-01 | 100.0% | 54.3% |
| 4jgiB02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.68 | 49.0 | 4.96e-01 | 100.0% | 75.4% |
| 3gbvA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.67 | 50.0 | 4.76e-01 | 100.0% | 67.1% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 47.0 | 4.68e-01 | 100.0% | 70.1% |
| 2e4uA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 49.0 | 4.39e-01 | 100.0% | 56.6% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.65 | 52.0 | 3.93e-01 | 100.0% | 36.3% |
| 4zjpA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.64 | 53.0 | 5.07e-01 | 100.0% | 77.1% |
| 2wteA01 | 3.40.50.11700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 47.0 | 4.58e-01 | 100.0% | 70.3% |
| 3clkA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 5.13e-01 | 100.0% | 80.7% |
| 4yleA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 5.06e-01 | 100.0% | 77.4% |
| 1jx6A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 52.0 | 4.94e-01 | 100.0% | 74.2% |
| 4maaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 55.0 | 4.62e-01 | 100.0% | 57.6% |
| 3i09A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 56.0 | 4.69e-01 | 100.0% | 58.5% |
| 3td9A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 4.56e-01 | 100.0% | 57.8% |
| 1peaA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 53.0 | 4.61e-01 | 100.0% | 59.9% |
| 3c85A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 47.0 | 4.50e-01 | 100.0% | 68.0% |
| 3hutA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 53.0 | 4.56e-01 | 100.0% | 60.2% |
| 3sg0A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 53.0 | 4.41e-01 | 100.0% | 56.0% |
| 2nvwB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 49.0 | 4.21e-01 | 100.0% | 55.6% |
| 3bzcA03 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.60 | 43.0 | 4.36e-01 | 100.0% | 73.4% |
| 4ru1A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.60 | 56.0 | 5.31e-01 | 100.0% | 88.5% |
| 1bapA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 52.0 | 4.73e-01 | 100.0% | 72.5% |
| 3i6iA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 48.0 | 4.22e-01 | 99.2% | 60.0% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.57 | 52.0 | 4.19e-01 | 98.4% | 100.0% |
| 1jmkC01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 45.0 | 4.08e-01 | 88.2% | 61.6% |
| 2dr3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 49.0 | 4.02e-01 | 100.0% | 51.7% |
| 6oz7B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 51.0 | 4.15e-01 | 100.0% | 58.9% |
| 4xymC03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.56 | 48.0 | 4.36e-01 | 100.0% | 69.8% |
| 2z5lA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 50.0 | 3.42e-01 | 100.0% | 31.1% |
| 2el7B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 50.0 | 4.17e-01 | 100.0% | 83.4% |
| 6l1kA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 50.0 | 4.49e-01 | 100.0% | 82.2% |
| 3k9tA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 47.0 | 3.74e-01 | 93.7% | 71.0% |
| 4yrbA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 51.0 | 4.27e-01 | 100.0% | 72.8% |
| 3n8hA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 50.0 | 4.48e-01 | 100.0% | 88.1% |
| 2mr5A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 44.0 | 4.36e-01 | 100.0% | 81.6% |
| 3qtgA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.54 | 41.0 | 3.31e-01 | 99.2% | 41.7% |
| 4ldpA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 48.0 | 4.07e-01 | 100.0% | 58.6% |
| 3u1vA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 48.0 | 4.05e-01 | 98.4% | 81.9% |
| 1rkxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 4.24e-01 | 100.0% | 97.9% |
| 2xauA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.64e-01 | 100.0% | 49.6% |
| 3ksuB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 48.0 | 3.99e-01 | 100.0% | 61.9% |
| 4djaA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 41.0 | 3.82e-01 | 100.0% | 65.0% |
| 6yuqA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 44.0 | 3.61e-01 | 92.9% | 76.5% |
| 1xknA00 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.52 | 34.0 | 2.54e-01 | 79.5% | 23.8% |
| 1z06A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 47.0 | 4.32e-01 | 100.0% | 77.6% |
| 3nd5A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 44.0 | 4.14e-01 | 100.0% | 76.3% |
| 3hn7A03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.51 | 42.0 | 4.04e-01 | 90.6% | 75.5% |
| 2e7yB00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 38.0 | 3.02e-01 | 89.0% | 37.5% |
| 2wvsA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.50 | 45.0 | 3.36e-01 | 99.2% | 64.9% |
| 3a4lB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 45.0 | 4.07e-01 | 100.0% | 77.5% |
| 5irlA02 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.50 | 42.0 | 3.21e-01 | 92.9% | 44.4% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3164915 | 3019.1.1.11 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 | 0.83 | 76.0 | 6.12e-01 | 98.4% | 54.7% |
| 1487353 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.81 | 56.0 | 5.66e-01 | 100.0% | 71.4% |
| 3287922 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.80 | 55.0 | 5.21e-01 | 100.0% | 59.3% |
| 5060661 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.80 | 76.0 | 5.93e-01 | 100.0% | 52.0% |
| 4889794 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.75 | 67.0 | 5.52e-01 | 100.0% | 55.7% |
| 3513465 | 2499.2.1.6 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 | 0.74 | 68.0 | 5.36e-01 | 100.0% | 51.0% |
| 2589656 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.74 | 68.0 | 6.01e-01 | 100.0% | 73.5% |
| 1253074 | 2007.1.2.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_3 | 0.70 | 52.0 | 5.17e-01 | 100.0% | 75.4% |
| 4943475 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 50.0 | 4.26e-01 | 100.0% | 45.7% |
| 1504769 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.69 | 52.0 | 5.41e-01 | 100.0% | 84.7% |
| 4028613 | 7522.1.1.1 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C | 0.68 | 51.0 | 4.71e-01 | 100.0% | 61.2% |
| 3931359 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.68 | 54.0 | 4.15e-01 | 100.0% | 38.9% |
| 5009930 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.66 | 50.0 | 4.91e-01 | 100.0% | 74.8% |
| 5044966 | 2007.1.2.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp | 0.66 | 56.0 | 4.12e-01 | 100.0% | 35.5% |
| 1252688 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 48.0 | 3.59e-01 | 100.0% | 30.8% |
| 3914983 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 48.0 | 4.22e-01 | 100.0% | 52.4% |
| 3381753 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 56.0 | 4.58e-01 | 100.0% | 52.7% |
| 3293144 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.64 | 54.0 | 5.50e-01 | 100.0% | 91.2% |
| 1253170 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.64 | 55.0 | 5.64e-01 | 100.0% | 96.7% |
| 5063227 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 48.0 | 4.10e-01 | 100.0% | 49.8% |
| 3412552 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.63 | 50.0 | 4.37e-01 | 100.0% | 56.3% |
| 1173138 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.63 | 53.0 | 5.60e-01 | 100.0% | 100.0% |
| 4569254 | 2007.1.2.9 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF3798 | 0.62 | 53.0 | 4.74e-01 | 100.0% | 65.0% |
| 1657329 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.62 | 52.0 | 5.47e-01 | 100.0% | 98.3% |
| 4870004 | 2007.1.2.12 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_5 | 0.62 | 53.0 | 5.43e-01 | 100.0% | 95.1% |
| 1173139 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.61 | 53.0 | 5.52e-01 | 100.0% | 100.0% |
| 4049316 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.61 | 56.0 | 5.18e-01 | 100.0% | 81.9% |
| 4984246 | 2007.3.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Citrate_bind | 0.60 | 50.0 | 4.38e-01 | 88.2% | 74.1% |
| 4417234 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.60 | 48.0 | 3.94e-01 | 100.0% | 47.0% |
| 4948240 | 7569.1.1.0 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like | 0.59 | 54.0 | 4.73e-01 | 100.0% | 69.9% |
| 3593486 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.58 | 53.0 | 4.26e-01 | 100.0% | 77.6% |
| 4014119 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.58 | 53.0 | 4.18e-01 | 100.0% | 76.2% |
| 3733836 | 2006.1.1.25 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_SAK_1 | 0.58 | 53.0 | 4.17e-01 | 100.0% | 77.3% |
| 4025268 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.57 | 52.0 | 3.87e-01 | 100.0% | 97.2% |
| 4979410 | 7569.1.1.0 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like | 0.57 | 51.0 | 4.75e-01 | 96.9% | 80.0% |
| 4352811 | 7529.1.1.3 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Peptidase_M17_N | 0.57 | 52.0 | 4.77e-01 | 100.0% | 81.8% |
| 4178455 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.56 | 51.0 | 3.95e-01 | 100.0% | 92.3% |
| 4989007 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.56 | 51.0 | 4.91e-01 | 99.2% | 97.2% |
| 4145928 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.56 | 47.0 | 3.72e-01 | 92.9% | 78.5% |
| 3938049 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.55 | 51.0 | 4.25e-01 | 100.0% | 100.0% |
| 3691484 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 44.0 | 3.63e-01 | 99.2% | 47.4% |
| 4202347 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.54 | 46.0 | 3.11e-01 | 92.9% | 74.4% |
| 4125316 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.54 | 50.0 | 3.87e-01 | 100.0% | 76.3% |
| 4066502 | 1075.4.1.9 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_tran+ABC_membrane | 0.54 | 46.0 | 2.68e-01 | 93.7% | 77.5% |
| 3449915 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.53 | 49.0 | 3.64e-01 | 100.0% | 48.3% |
| 3706503 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.53 | 45.0 | 3.82e-01 | 100.0% | 55.8% |
| 3958829 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.53 | 43.0 | 3.66e-01 | 99.2% | 51.8% |
| 4884287 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.53 | 43.0 | 3.40e-01 | 100.0% | 41.2% |
| 4999939 | 2004.1.1.211 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CLP1_P | 0.53 | 48.0 | 4.14e-01 | 100.0% | 78.5% |
| 3936155 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 39.0 | 3.39e-01 | 78.0% | 70.5% |
| 4367798 | 2004.1.1.65 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › 6PF2K | 0.52 | 48.0 | 3.96e-01 | 100.0% | 78.6% |
| 4451687 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.52 | 45.0 | 3.07e-01 | 92.9% | 30.2% |
| 4979234 | 7584.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins | 0.52 | 46.0 | 3.55e-01 | 100.0% | 46.1% |
| 3250110 | 2003.1.1.53 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NmrA | 0.51 | 46.0 | 3.51e-01 | 100.0% | 42.4% |
| 3283865 | 2004.1.1.64 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › APS_kinase | 0.51 | 46.0 | 4.03e-01 | 100.0% | 77.9% |
| 3701350 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 45.0 | 4.01e-01 | 100.0% | 76.3% |
D6
medium
residues 38-86_420-486
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4depC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 41.0 | 4.35e-01 | 99.1% | 76.5% |
| 5wy8B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 41.0 | 4.41e-01 | 98.3% | 80.6% |
| 3u7vA02 | 2.60.220.20 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › putative beta-Galactosidase from caulobacter crescentus | 0.61 | 38.0 | 3.61e-01 | 93.1% | 50.7% |
| 1f97A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 42.0 | 4.47e-01 | 91.4% | 81.4% |
| 2dlgA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 37.0 | 4.23e-01 | 87.9% | 86.3% |
| 3wo4B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 40.0 | 4.36e-01 | 90.5% | 81.4% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 36.0 | 4.08e-01 | 89.7% | 80.2% |
| 5utkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 39.0 | 4.30e-01 | 100.0% | 84.4% |
| 1cs6A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 37.0 | 4.11e-01 | 91.4% | 78.9% |
| 3p3yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 36.0 | 4.00e-01 | 91.4% | 76.7% |
| 3qqnA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 4.50e-01 | 100.0% | 78.4% |
| 1bpvA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 40.0 | 4.15e-01 | 94.0% | 75.0% |
| 8ediA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 39.0 | 4.29e-01 | 100.0% | 84.6% |
| 8bxrA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 37.0 | 4.10e-01 | 88.8% | 81.6% |
| 5e4sA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 39.0 | 4.23e-01 | 90.5% | 83.0% |
| 2crmA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 37.0 | 4.28e-01 | 88.8% | 92.4% |
| 2v5yA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 4.17e-01 | 100.0% | 81.1% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 4.17e-01 | 90.5% | 82.6% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 46.0 | 4.31e-01 | 100.0% | 67.1% |
| 3v10A02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 46.0 | 4.29e-01 | 100.0% | 67.1% |
| 3wuzA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.58e-01 | 94.0% | 82.5% |
| 5noiA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 39.0 | 4.10e-01 | 89.7% | 77.5% |
| 3utoB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 39.0 | 4.10e-01 | 100.0% | 79.0% |
| 3omzA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 4.28e-01 | 87.9% | 81.6% |
| 2yuxA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 39.0 | 4.00e-01 | 100.0% | 73.1% |
| 7mxdX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 4.58e-01 | 91.4% | 83.2% |
| 7ok5A06 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 37.0 | 4.08e-01 | 100.0% | 85.1% |
| 2jllA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 38.0 | 4.06e-01 | 100.0% | 81.6% |
| 3og6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 37.0 | 3.99e-01 | 100.0% | 78.8% |
| 1fyhB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.19e-01 | 100.0% | 82.5% |
| 1cs6A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 38.0 | 4.11e-01 | 94.0% | 82.7% |
| 1imhC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.23e-01 | 100.0% | 83.0% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 51.0 | 4.61e-01 | 100.0% | 75.0% |
| 1neuA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 45.0 | 4.55e-01 | 100.0% | 88.7% |
| 5e55B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 4.15e-01 | 91.4% | 89.2% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 34.0 | 3.71e-01 | 91.4% | 76.7% |
| 1x5aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 35.0 | 3.83e-01 | 94.0% | 80.2% |
| 1x5xA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 37.0 | 3.83e-01 | 94.0% | 73.4% |
| 1cfbA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.92e-01 | 100.0% | 78.3% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 43.0 | 4.43e-01 | 99.1% | 94.3% |
| 5tr9A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 41.0 | 4.37e-01 | 95.7% | 99.0% |
| 8gsxA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 47.0 | 4.27e-01 | 94.8% | 77.5% |
| 2v3mA00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.53 | 36.0 | 3.85e-01 | 96.6% | 85.1% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.94e-01 | 100.0% | 84.3% |
| 3a35A02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 37.0 | 4.00e-01 | 98.3% | 95.7% |
| 4dipH00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.51 | 39.0 | 3.94e-01 | 83.6% | 92.4% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 36.0 | 3.61e-01 | 96.6% | 73.3% |
| 1y4wA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 39.0 | 2.80e-01 | 81.9% | 80.3% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4114688 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 39.0 | 3.86e-01 | 91.4% | 60.0% |
| 4221261 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.61 | 39.0 | 3.76e-01 | 100.0% | 56.2% |
| 3899631 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 37.0 | 3.00e-01 | 91.4% | 30.4% |
| 3775114 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 38.0 | 4.18e-01 | 100.0% | 77.9% |
| 4237435 | 11.1.1.396 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig | 0.60 | 40.0 | 3.97e-01 | 90.5% | 64.2% |
| 3534565 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.59 | 39.0 | 4.23e-01 | 100.0% | 81.1% |
| 3525041 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 41.0 | 3.36e-01 | 94.0% | 38.1% |
| 3323457 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 4.26e-01 | 93.1% | 78.1% |
| 2061421 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.59 | 39.0 | 4.19e-01 | 100.0% | 79.6% |
| 3572285 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 41.0 | 4.27e-01 | 91.4% | 79.0% |
| 3916728 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.58 | 38.0 | 4.15e-01 | 94.0% | 81.1% |
| 3572284 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.58 | 40.0 | 4.23e-01 | 91.4% | 82.0% |
| 3618970 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.58 | 35.0 | 3.65e-01 | 92.2% | 64.8% |
| 3748642 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.57 | 40.0 | 3.28e-01 | 100.0% | 37.3% |
| 3757265 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.57 | 39.0 | 4.15e-01 | 99.1% | 81.0% |
| 4952899 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 38.0 | 4.32e-01 | 96.6% | 97.5% |
| 3921111 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 4.23e-01 | 88.8% | 81.0% |
| 3854366 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.57 | 45.0 | 4.72e-01 | 93.1% | 94.3% |
| 5059831 | 11.1.1.866 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Rha78A_N | 0.57 | 39.0 | 4.12e-01 | 100.0% | 81.0% |
| 3969131 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 42.0 | 4.53e-01 | 99.1% | 95.8% |
| 4116672 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 40.0 | 3.82e-01 | 94.0% | 63.0% |
| 3938023 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 4.17e-01 | 94.0% | 83.0% |
| 3868227 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 4.40e-01 | 91.4% | 92.6% |
| 1554319 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 51.0 | 4.60e-01 | 100.0% | 74.5% |
| 3514456 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 36.0 | 3.87e-01 | 100.0% | 77.0% |
| 3574456 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 38.0 | 3.92e-01 | 100.0% | 77.1% |
| 5049540 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 4.19e-01 | 90.5% | 88.4% |
| 5068851 | 11.1.1.866 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Rha78A_N | 0.55 | 38.0 | 4.06e-01 | 100.0% | 83.0% |
| 3936478 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.55 | 42.0 | 4.34e-01 | 100.0% | 85.5% |
| 4028142 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 44.0 | 4.45e-01 | 99.1% | 87.8% |
| 3183224 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.54 | 42.0 | 4.49e-01 | 100.0% | 98.0% |
| 3963302 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.54 | 41.0 | 4.30e-01 | 99.1% | 90.5% |
| 4024939 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 4.14e-01 | 87.9% | 87.1% |
| 3972868 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.54 | 41.0 | 4.37e-01 | 94.0% | 96.0% |
| 3888090 | 11.1.1.794 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LIFR_D4 | 0.54 | 35.0 | 3.83e-01 | 99.1% | 84.4% |
| 5003347 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.54 | 48.0 | 4.43e-01 | 100.0% | 85.3% |
| 4069807 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.54 | 40.0 | 4.25e-01 | 99.1% | 92.0% |
| 3549361 | 11.1.1.794 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LIFR_D4 | 0.53 | 37.0 | 3.92e-01 | 100.0% | 81.0% |
| 5062143 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.53 | 33.0 | 3.74e-01 | 100.0% | 84.7% |
| 3486746 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.98e-01 | 100.0% | 69.7% |
| 3850571 | 1.1.7.114 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › CATSPERB_head | 0.53 | 36.0 | 3.89e-01 | 98.3% | 88.9% |
| 3699180 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.52 | 42.0 | 4.12e-01 | 99.1% | 80.8% |
| 4132165 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 40.0 | 4.18e-01 | 94.0% | 91.4% |
| 3974053 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.52 | 40.0 | 4.26e-01 | 99.1% | 97.0% |
| 5057694 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.52 | 40.0 | 4.23e-01 | 98.3% | 97.0% |
| 4942656 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.51 | 40.0 | 4.27e-01 | 99.1% | 98.0% |
| 4204478 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 37.0 | 3.92e-01 | 91.4% | 85.7% |
| 3481162 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.79e-01 | 100.0% | 82.9% |
| 4930829 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 39.0 | 4.00e-01 | 90.5% | 85.2% |
D7
medium
residues 87-171_390-419
Domain cluster:
representative
CATH (58)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.73 | 41.0 | 4.27e-01 | 95.7% | 59.4% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.73 | 54.0 | 6.00e-01 | 100.0% | 97.8% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 48.0 | 4.85e-01 | 87.0% | 70.2% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.70 | 47.0 | 5.56e-01 | 94.8% | 100.0% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 48.0 | 5.56e-01 | 94.8% | 100.0% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 42.0 | 4.40e-01 | 94.8% | 67.3% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 42.0 | 4.36e-01 | 95.7% | 68.2% |
| 5hmaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 40.0 | 4.17e-01 | 94.8% | 66.3% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 44.0 | 4.02e-01 | 87.8% | 52.6% |
| 1d1nA00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 47.0 | 5.08e-01 | 100.0% | 91.9% |
| 4aw7A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 38.0 | 3.86e-01 | 100.0% | 59.3% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 39.0 | 4.58e-01 | 97.4% | 93.8% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.61 | 46.0 | 5.05e-01 | 84.3% | 98.9% |
| 3q39B02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.60 | 52.0 | 5.39e-01 | 98.3% | 99.1% |
| 6j0qA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.60 | 52.0 | 5.34e-01 | 98.3% | 99.1% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 37.0 | 4.49e-01 | 100.0% | 98.6% |
| 4rdlA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.60 | 50.0 | 5.18e-01 | 98.3% | 99.1% |
| 1vf7F01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.60 | 49.0 | 5.16e-01 | 97.4% | 100.0% |
| 4qv2A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.59 | 52.0 | 5.23e-01 | 98.3% | 94.1% |
| 2f5tX02 | 2.30.30.690 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 44.0 | 4.94e-01 | 100.0% | 100.0% |
| 1cqxA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 51.0 | 5.19e-01 | 98.3% | 97.3% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 43.0 | 4.24e-01 | 86.1% | 72.6% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 52.0 | 5.15e-01 | 97.4% | 97.5% |
| 2lw3A00 | 2.60.40.2880 | Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain | 0.57 | 30.0 | 3.33e-01 | 80.0% | 62.2% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 43.0 | 4.12e-01 | 80.0% | 97.8% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 45.0 | 4.30e-01 | 86.1% | 71.1% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 46.0 | 4.31e-01 | 88.7% | 71.0% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 48.0 | 5.03e-01 | 95.7% | 100.0% |
| 3og4B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.17e-01 | 100.0% | 81.6% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 46.0 | 3.86e-01 | 87.0% | 67.0% |
| 3f7eA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 45.0 | 4.37e-01 | 86.1% | 78.1% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 44.0 | 4.15e-01 | 86.1% | 69.3% |
| 5escA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 43.0 | 4.29e-01 | 87.8% | 79.0% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 45.0 | 4.18e-01 | 86.1% | 81.1% |
| 1ci0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 45.0 | 3.75e-01 | 87.8% | 64.2% |
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 48.0 | 3.93e-01 | 93.9% | 72.9% |
| 6brbD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 34.0 | 3.83e-01 | 86.1% | 81.6% |
| 1rfeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 44.0 | 4.22e-01 | 87.8% | 73.5% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 42.0 | 4.14e-01 | 86.1% | 76.0% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 44.0 | 3.93e-01 | 87.0% | 74.8% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 43.0 | 4.05e-01 | 86.1% | 73.2% |
| 3dnhA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 43.0 | 3.98e-01 | 87.0% | 75.5% |
| 5yjlD01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 40.0 | 3.81e-01 | 86.1% | 64.8% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.53 | 42.0 | 4.32e-01 | 100.0% | 89.2% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.53 | 44.0 | 4.55e-01 | 100.0% | 95.4% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.53 | 40.0 | 4.36e-01 | 88.7% | 95.8% |
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 43.0 | 3.76e-01 | 86.1% | 67.9% |
| 3bpkA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 45.0 | 3.91e-01 | 93.0% | 83.2% |
| 2vpaA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 3.51e-01 | 86.1% | 64.2% |
| 1cd9D01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 3.97e-01 | 100.0% | 82.2% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.52 | 35.0 | 3.48e-01 | 80.0% | 64.2% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 43.0 | 4.01e-01 | 87.8% | 81.0% |
| 1y7eA02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.52 | 46.0 | 4.59e-01 | 97.4% | 100.0% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 42.0 | 3.88e-01 | 87.8% | 71.1% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.51 | 45.0 | 4.54e-01 | 98.3% | 96.6% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 42.0 | 3.98e-01 | 87.8% | 81.5% |
| 1dyoA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 46.0 | 4.16e-01 | 100.0% | 95.5% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.51 | 41.0 | 3.51e-01 | 100.0% | 53.7% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3267872 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 58.0 | 5.62e-01 | 99.1% | 72.3% |
| 4930890 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 48.0 | 5.74e-01 | 83.5% | 100.0% |
| 138887 | 1.1.5.32 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZNR | 0.71 | 48.0 | 4.79e-01 | 86.1% | 67.5% |
| 4606765 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.70 | 53.0 | 5.48e-01 | 100.0% | 84.5% |
| 4565791 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.70 | 52.0 | 5.79e-01 | 99.1% | 100.0% |
| 3971461 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 52.0 | 5.73e-01 | 99.1% | 100.0% |
| 3961371 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.67 | 42.0 | 4.94e-01 | 72.2% | 91.3% |
| 3449628 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.66 | 39.0 | 3.99e-01 | 93.0% | 58.3% |
| 3283078 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.66 | 43.0 | 3.98e-01 | 86.1% | 51.0% |
| 4117582 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.66 | 50.0 | 4.92e-01 | 99.1% | 73.6% |
| 4616814 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.65 | 53.0 | 5.61e-01 | 100.0% | 100.0% |
| 4400928 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.65 | 50.0 | 4.93e-01 | 100.0% | 76.0% |
| 3552831 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.64 | 55.0 | 5.71e-01 | 98.3% | 100.0% |
| 4033620 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.63 | 50.0 | 4.87e-01 | 100.0% | 75.4% |
| 2455725 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.62 | 50.0 | 5.27e-01 | 97.4% | 94.3% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.61 | 44.0 | 4.84e-01 | 95.7% | 96.7% |
| 4154798 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.60 | 51.0 | 5.21e-01 | 100.0% | 95.5% |
| 5045573 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 43.0 | 4.46e-01 | 99.1% | 81.5% |
| 4881921 | 10.2.1.14 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.59 | 53.0 | 3.91e-01 | 100.0% | 48.9% |
| 4462290 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.58 | 47.0 | 4.94e-01 | 95.7% | 100.0% |
| 3515328 | 10.10.1.0 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) | 0.57 | 38.0 | 4.04e-01 | 79.1% | 77.0% |
| 3284021 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 50.0 | 5.09e-01 | 99.1% | 99.1% |
| 4872941 | 10.2.1.43 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Calici_coat_C | 0.57 | 50.0 | 4.98e-01 | 98.3% | 94.1% |
| 3056322 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.57 | 49.0 | 5.05e-01 | 97.4% | 98.2% |
| 3281573 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.56 | 44.0 | 4.17e-01 | 87.8% | 70.4% |
| 3810482 | 1.1.7.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B | 0.56 | 49.0 | 4.65e-01 | 96.5% | 95.6% |
| 4642857 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 38.0 | 4.38e-01 | 95.7% | 100.0% |
| 3496352 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 50.0 | 4.97e-01 | 99.1% | 98.3% |
| 5076889 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 45.0 | 4.32e-01 | 87.8% | 80.5% |
| 3279334 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 44.0 | 4.27e-01 | 86.1% | 79.2% |
| 4928784 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.55 | 44.0 | 3.69e-01 | 87.8% | 61.5% |
| 4999024 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 44.0 | 3.73e-01 | 87.0% | 79.8% |
| 3280029 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 45.0 | 4.27e-01 | 88.7% | 76.3% |
| 4987534 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 45.0 | 4.09e-01 | 87.8% | 73.3% |
| 4929515 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.54 | 44.0 | 4.06e-01 | 87.0% | 80.7% |
| 3990561 | 11.1.1.955 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th | 0.54 | 40.0 | 4.18e-01 | 97.4% | 85.7% |
| 4257482 | 1.1.5.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C | 0.54 | 44.0 | 3.59e-01 | 87.8% | 61.9% |
| 3969739 | 1.1.17.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › PF30586 | 0.54 | 48.0 | 3.76e-01 | 96.5% | 62.9% |
| 4028467 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.54 | 48.0 | 3.59e-01 | 96.5% | 72.4% |
| 3615394 | 11.1.4.80 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › C2_ITFG1 | 0.54 | 36.0 | 3.61e-01 | 80.9% | 65.8% |
| 3965278 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.54 | 42.0 | 4.35e-01 | 100.0% | 90.0% |
| 5046269 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 41.0 | 3.52e-01 | 100.0% | 51.7% |
| 4119987 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.53 | 48.0 | 3.84e-01 | 98.3% | 75.6% |
| 3948218 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.53 | 47.0 | 3.65e-01 | 95.7% | 72.7% |
| 5071729 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 4.18e-01 | 100.0% | 86.4% |
| 3937327 | 11.1.4.80 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › C2_ITFG1 | 0.53 | 38.0 | 3.70e-01 | 81.7% | 66.9% |
| 4329871 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.53 | 48.0 | 4.04e-01 | 99.1% | 80.5% |
| 4972027 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 4.01e-01 | 100.0% | 84.8% |
| 5018015 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.52 | 42.0 | 3.96e-01 | 87.8% | 73.1% |
| 4606129 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.52 | 42.0 | 4.28e-01 | 99.1% | 90.0% |
| 398505 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.52 | 47.0 | 3.74e-01 | 99.1% | 70.6% |
| 3240153 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.52 | 45.0 | 4.42e-01 | 96.5% | 96.0% |
| 3231372 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.51 | 46.0 | 4.42e-01 | 100.0% | 94.6% |
| 4072296 | 269.1.1.1 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen_C | 0.51 | 45.0 | 3.39e-01 | 100.0% | 69.2% |
| 3672433 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.51 | 43.0 | 3.17e-01 | 89.6% | 47.2% |
| 3223473 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.50 | 45.0 | 4.44e-01 | 100.0% | 99.2% |
| 3231376 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.50 | 45.0 | 4.35e-01 | 100.0% | 94.6% |
| 4512371 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.50 | 43.0 | 3.87e-01 | 93.0% | 75.6% |
D8
medium
residues 726-846
Domain cluster:
rep: LC644975.1__BCZ76060.1__X__00055__D244-386
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.52 | 26.0 | 3.41e-01 | 79.3% | 96.5% |
| 3pieA02 | 3.30.1370.250 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.51 | 34.0 | 3.71e-01 | 85.1% | 81.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5060661 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.92 | 61.0 | 4.65e-01 | 86.8% | 32.8% |
| 2391375 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.89 | 67.0 | 5.28e-01 | 82.6% | 41.2% |
| 4873217 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.88 | 75.0 | 6.86e-01 | 90.9% | 70.9% |
| 4988098 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.86 | 60.0 | 4.66e-01 | 86.0% | 36.6% |
| 4888782 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.83 | 79.0 | 5.85e-01 | 100.0% | 44.6% |
| 3164915 | 3019.1.1.11 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Phage_sheath_1 | 0.81 | 59.0 | 4.68e-01 | 78.5% | 40.0% |
| 4882286 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.80 | 64.0 | 5.85e-01 | 82.6% | 66.2% |
| 2141717 | 2499.2.1.5 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › VipB | 0.78 | 60.0 | 4.24e-01 | 80.2% | 58.0% |
| 1515363 | 2499.2.1.5 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › VipB | 0.76 | 58.0 | 4.23e-01 | 79.3% | 65.6% |
| 3278947 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.57 | 35.0 | 3.22e-01 | 83.5% | 46.5% |
| 3252861 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.51 | 36.0 | 3.03e-01 | 81.0% | 41.9% |
| 4614874 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.51 | 25.0 | 3.32e-01 | 76.9% | 96.4% |
| 3358136 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.50 | 27.0 | 3.20e-01 | 80.2% | 76.2% |
| 3343337 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.50 | 27.0 | 3.20e-01 | 81.0% | 74.1% |
| 3456447 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.50 | 28.0 | 3.30e-01 | 83.5% | 80.0% |
| 3226161 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.50 | 27.0 | 3.17e-01 | 81.8% | 74.1% |