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SR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00059

Bact-Vir

SR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00059

Identity

Kingdom:
phage

Quality

82.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 316-417
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4955690 327.10.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related 0.53 29.0 3.36e-01 76.5% 75.7%
D2 medium residues 15-186
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5tuuA00 1.20.140.80 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Transcription factor DP 0.55 26.0 2.83e-01 77.3% 51.4%
3a35A02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 27.0 3.45e-01 83.7% 87.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3353072 4154.1.1.1 ↗ beta duplicates or obligate multimers › E2F-DP heterodimerization region › E2F-DP heterodimerization region › E2F-DP heterodimerization region › DP 0.60 27.0 3.22e-01 76.7% 61.7%