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SR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00120
Bact-VirSR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00120
Identity
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-87
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ytlA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 30.0 | 3.81e-01 | 70.1% | 66.0% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 32.0 | 3.37e-01 | 72.4% | 46.8% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 33.0 | 3.58e-01 | 72.4% | 63.9% |
| 1ky9B03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.56 | 34.0 | 3.34e-01 | 73.6% | 54.3% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 31.0 | 3.31e-01 | 72.4% | 62.3% |
| 6iccA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 34.0 | 3.42e-01 | 77.0% | 61.6% |
| 2zplB00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 34.0 | 3.33e-01 | 75.9% | 57.4% |
| 4p04A01 | 2.60.40.3100 | Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain | 0.53 | 38.0 | 3.59e-01 | 74.7% | 86.8% |
| 7z47G01 | 2.60.40.1080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 35.0 | 3.74e-01 | 72.4% | 82.9% |
| 1x3zA04 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.53 | 31.0 | 3.70e-01 | 72.4% | 92.6% |
| 7w6zA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 35.0 | 3.50e-01 | 70.1% | 78.7% |
| 2kjkA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 32.0 | 3.10e-01 | 74.7% | 52.0% |
| 3tvzB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 35.0 | 3.06e-01 | 73.6% | 87.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2564164 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.57 | 35.0 | 3.57e-01 | 72.4% | 62.8% |
| 3596413 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.55 | 34.0 | 3.39e-01 | 75.9% | 58.9% |
| 3767943 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.54 | 38.0 | 3.03e-01 | 74.7% | 58.5% |
| 3241890 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 29.0 | 2.83e-01 | 70.1% | 46.0% |
| 4397259 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.53 | 37.0 | 3.56e-01 | 73.6% | 86.4% |
| 3611538 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.53 | 33.0 | 3.71e-01 | 73.6% | 96.4% |
| 3352831 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.52 | 43.0 | 2.86e-01 | 93.1% | 41.3% |
| 4212763 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.52 | 36.0 | 3.69e-01 | 72.4% | 95.3% |
| 3346613 | 3270.1.1.1 ↗ | a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 | 0.51 | 26.0 | 2.67e-01 | 73.6% | 43.3% |
| 3909529 | 2485.1.1.55 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FAF1 | 0.51 | 37.0 | 2.92e-01 | 78.2% | 75.4% |
| 4256903 | 7.1.1.5 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_2 | 0.50 | 35.0 | 3.46e-01 | 73.6% | 82.1% |