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SR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00185
Bact-VirSR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00185
Identity
- Kingdom:
- phage
Quality
77.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 71-177
Domain cluster:
rep: IMGVR_UViG_3300021509_000003-3300021509-Ga0190304_100009151__D537-667
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4d53A00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.79 | 72.0 | 6.71e-01 | 100.0% | 94.7% |
| 4ifaA01 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.77 | 70.0 | 5.13e-01 | 100.0% | 44.4% |
| 5vhgA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.76 | 70.0 | 6.16e-01 | 99.1% | 86.0% |
| 4p27A00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.74 | 67.0 | 5.93e-01 | 100.0% | 88.4% |
| 3u3lC00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.72 | 66.0 | 5.09e-01 | 100.0% | 67.4% |
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.71 | 64.0 | 4.65e-01 | 100.0% | 39.0% |
| 1cfeA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.70 | 64.0 | 5.90e-01 | 98.1% | 91.1% |
| 2vqeC02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.62 | 46.0 | 4.81e-01 | 77.6% | 91.0% |
| 1hxdA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.61 | 43.0 | 3.55e-01 | 73.8% | 59.4% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.60 | 37.0 | 3.64e-01 | 76.6% | 55.9% |
| 2ea9A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.59 | 41.0 | 4.33e-01 | 100.0% | 80.9% |
| 2e5aA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 42.0 | 3.25e-01 | 72.9% | 59.3% |
| 6cc0A01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.56 | 39.0 | 3.35e-01 | 70.1% | 77.4% |
| 3ci0J02 | 2.10.70.20 | Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains | 0.55 | 24.0 | 3.41e-01 | 100.0% | 86.0% |
| 2pofA00 | 3.30.428.30 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT family - CDH-like | 0.55 | 48.0 | 3.85e-01 | 97.2% | 69.1% |
| 3h2dB00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.55 | 41.0 | 3.74e-01 | 80.4% | 98.7% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.55 | 31.0 | 3.72e-01 | 79.4% | 83.1% |
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 35.0 | 3.26e-01 | 98.1% | 51.1% |
| 2basA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 38.0 | 3.71e-01 | 78.5% | 69.0% |
| 1ej6A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 32.0 | 3.37e-01 | 100.0% | 69.5% |
| 2h00B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 35.0 | 2.83e-01 | 70.1% | 81.4% |
| 3cu7A05 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.51 | 35.0 | 3.57e-01 | 72.0% | 99.1% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031162 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.83 | 76.0 | 7.09e-01 | 100.0% | 98.5% |
| 4942971 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.82 | 75.0 | 6.41e-01 | 100.0% | 99.4% |
| 5015571 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.81 | 74.0 | 6.49e-01 | 99.1% | 98.7% |
| 3964094 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.79 | 71.0 | 6.32e-01 | 97.2% | 90.0% |
| 1697211 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.79 | 72.0 | 6.71e-01 | 100.0% | 94.7% |
| 3283186 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.79 | 73.0 | 6.54e-01 | 100.0% | 93.1% |
| 5084002 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.78 | 72.0 | 6.67e-01 | 100.0% | 97.0% |
| 3607133 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.77 | 70.0 | 5.87e-01 | 98.1% | 100.0% |
| 1031145 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.77 | 70.0 | 6.53e-01 | 100.0% | 93.2% |
| 5029848 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.77 | 70.0 | 5.96e-01 | 100.0% | 81.2% |
| 3278331 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.77 | 69.0 | 6.27e-01 | 100.0% | 98.6% |
| 3448585 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.76 | 69.0 | 6.23e-01 | 100.0% | 97.9% |
| 3427297 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.76 | 70.0 | 6.25e-01 | 99.1% | 95.2% |
| 3933163 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.76 | 71.0 | 5.56e-01 | 100.0% | 84.1% |
| 3837302 | 273.1.1.4 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › PF25884 | 0.75 | 69.0 | 6.11e-01 | 100.0% | 91.3% |
| 3928387 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.75 | 69.0 | 6.00e-01 | 98.1% | 88.4% |
| 3939771 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.75 | 69.0 | 6.17e-01 | 98.1% | 86.8% |
| 3926346 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.75 | 69.0 | 6.07e-01 | 98.1% | 85.3% |
| 3934681 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.75 | 70.0 | 5.60e-01 | 100.0% | 66.7% |
| 3930029 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.74 | 69.0 | 6.20e-01 | 100.0% | 90.3% |
| 3477325 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.74 | 69.0 | 6.00e-01 | 100.0% | 82.9% |
| 3478962 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.74 | 69.0 | 5.90e-01 | 100.0% | 80.6% |
| 3656682 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.74 | 69.0 | 5.66e-01 | 100.0% | 72.4% |
| 3495541 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.74 | 69.0 | 6.10e-01 | 100.0% | 87.3% |
| 3398052 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.74 | 68.0 | 5.97e-01 | 99.1% | 81.8% |
| 3616880 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.74 | 69.0 | 5.58e-01 | 100.0% | 80.0% |
| 3931930 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.74 | 69.0 | 5.19e-01 | 100.0% | 75.6% |
| 3934165 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.74 | 68.0 | 5.58e-01 | 99.1% | 67.0% |
| 4081037 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.74 | 67.0 | 5.96e-01 | 97.2% | 88.3% |
| 3938651 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.74 | 68.0 | 5.82e-01 | 99.1% | 76.7% |
| 3412746 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.73 | 68.0 | 6.02e-01 | 100.0% | 84.7% |
| 3312180 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.73 | 68.0 | 5.88e-01 | 98.1% | 83.9% |
| 3449329 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.73 | 67.0 | 5.80e-01 | 98.1% | 86.3% |
| 3926699 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.73 | 68.0 | 5.60e-01 | 99.1% | 69.4% |
| 3586795 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.73 | 68.0 | 5.59e-01 | 100.0% | 79.1% |
| 3915349 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.73 | 68.0 | 5.73e-01 | 100.0% | 77.6% |
| 5008575 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.73 | 66.0 | 6.07e-01 | 100.0% | 96.4% |
| 3939102 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.72 | 67.0 | 5.52e-01 | 100.0% | 67.9% |
| 3220818 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.72 | 67.0 | 5.52e-01 | 100.0% | 77.0% |
| 3416151 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.72 | 65.0 | 5.61e-01 | 98.1% | 92.1% |
| 3405770 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.72 | 66.0 | 5.84e-01 | 100.0% | 85.0% |
| 3309625 | 273.1.1.4 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › PF25884 | 0.72 | 64.0 | 6.02e-01 | 98.1% | 98.5% |
| 224049 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.71 | 65.0 | 6.24e-01 | 100.0% | 95.9% |
| 3812911 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.71 | 65.0 | 5.89e-01 | 99.1% | 95.7% |
| 3470151 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.71 | 65.0 | 5.63e-01 | 100.0% | 90.0% |
| 3408025 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.71 | 66.0 | 5.74e-01 | 100.0% | 85.2% |
| 3924571 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.71 | 66.0 | 5.69e-01 | 100.0% | 77.8% |
| 3538234 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.71 | 54.0 | 5.26e-01 | 79.4% | 85.2% |
| 3936959 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.70 | 63.0 | 5.71e-01 | 100.0% | 87.5% |
| 3588250 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.69 | 63.0 | 5.61e-01 | 100.0% | 94.7% |
| 3940282 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.69 | 63.0 | 5.38e-01 | 99.1% | 75.2% |
| 3804390 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.69 | 62.0 | 5.74e-01 | 99.1% | 91.1% |
| 3932803 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.68 | 62.0 | 5.21e-01 | 100.0% | 70.0% |
| 3937255 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.68 | 61.0 | 5.41e-01 | 98.1% | 79.3% |
| 3938738 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.68 | 61.0 | 5.24e-01 | 100.0% | 73.5% |
| 3239073 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.67 | 61.0 | 5.57e-01 | 100.0% | 88.6% |
| 3923217 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.67 | 60.0 | 5.44e-01 | 100.0% | 86.8% |
| 3612359 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.67 | 51.0 | 4.99e-01 | 80.4% | 86.8% |
| 3226972 | 864.1.1.2 ↗ | a+b two layers › DLC › DLC › DLC › Tctex-1 | 0.66 | 50.0 | 4.92e-01 | 80.4% | 84.7% |
| 3235186 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.65 | 59.0 | 5.87e-01 | 99.1% | 100.0% |
| 4952061 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.64 | 48.0 | 4.61e-01 | 79.4% | 100.0% |
| 3604296 | 223.8.1.0 ↗ | a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain | 0.60 | 46.0 | 4.87e-01 | 79.4% | 96.8% |
| 4940969 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 42.0 | 4.65e-01 | 80.4% | 92.9% |
| 3968142 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 39.0 | 3.40e-01 | 73.8% | 95.3% |
| 3974239 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 42.0 | 4.27e-01 | 79.4% | 98.1% |