Back to structures

SR-VP_0-2_scaffold_141_2143444_prodigal-single.1__X__X__00025

Bact-Vir

SR-VP_0-2_scaffold_141_2143444_prodigal-single.1__X__X__00025

Identity

Kingdom:
phage

Quality

92.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-88
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fxkC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.70 48.0 4.09e-01 93.0% 45.9%
3dt5A00 1.10.3940.10 Mainly Alpha › Orthogonal Bundle › AF_0924 fold › AF_0924 domain 0.65 37.0 3.29e-01 73.3% 41.2%
3vw7A01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.61 42.0 2.94e-01 72.1% 47.5%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3412402 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 33.0 2.99e-01 73.3% 47.8%
D2 medium residues 89-152
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02945.22 best Endonuclease_7 44.7 1.40e-11 81.2% 58.5%