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SR-VP_0-2_scaffold_141_2143444_prodigal-single.1__X__X__00025
Bact-VirSR-VP_0-2_scaffold_141_2143444_prodigal-single.1__X__X__00025
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-88
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 48.0 | 4.09e-01 | 93.0% | 45.9% |
| 3dt5A00 | 1.10.3940.10 | Mainly Alpha › Orthogonal Bundle › AF_0924 fold › AF_0924 domain | 0.65 | 37.0 | 3.29e-01 | 73.3% | 41.2% |
| 3vw7A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.61 | 42.0 | 2.94e-01 | 72.1% | 47.5% |
D2
medium
residues 89-152
Domain cluster:
rep: OK283618.1__UCR92177.1__LPLM1_00042__00042__D87-159
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02945.22 best | Endonuclease_7 | 44.7 | 1.40e-11 | 81.2% | 58.5% |