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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00004
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00004
Identity
- Kingdom:
- phage
Quality
67.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-68
Domain cluster:
representative
CATH (86)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a2bA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.76 | 54.0 | 4.37e-01 | 75.0% | 44.2% |
| 3wt0A02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.74 | 52.0 | 3.68e-01 | 75.0% | 68.1% |
| 4g41A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.72 | 53.0 | 3.44e-01 | 80.8% | 18.2% |
| 2nrhB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.71 | 49.0 | 3.57e-01 | 73.1% | 52.1% |
| 5eoxB03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.71 | 50.0 | 3.76e-01 | 75.0% | 65.6% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.71 | 49.0 | 3.02e-01 | 73.1% | 31.8% |
| 3ec1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 53.0 | 3.75e-01 | 82.7% | 32.5% |
| 4h0oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.70 | 49.0 | 3.41e-01 | 75.0% | 35.4% |
| 1t6cA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.70 | 49.0 | 3.37e-01 | 75.0% | 36.5% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.69 | 51.0 | 3.03e-01 | 78.8% | 18.5% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 51.0 | 3.68e-01 | 78.8% | 31.2% |
| 1sazA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.69 | 48.0 | 3.36e-01 | 75.0% | 32.4% |
| 3kljA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.67 | 49.0 | 4.21e-01 | 82.7% | 48.2% |
| 3wucB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 46.0 | 3.45e-01 | 73.1% | 49.6% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 50.0 | 3.66e-01 | 78.8% | 77.9% |
| 3eeiA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.67 | 49.0 | 3.27e-01 | 82.7% | 19.0% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.66 | 48.0 | 3.92e-01 | 78.8% | 71.0% |
| 2aujD03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.66 | 56.0 | 5.31e-01 | 96.2% | 88.7% |
| 1ei5A03 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.66 | 47.0 | 3.83e-01 | 76.9% | 69.6% |
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 47.0 | 3.84e-01 | 76.9% | 48.5% |
| 2e4qA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.65 | 46.0 | 3.67e-01 | 75.0% | 47.2% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 50.0 | 3.72e-01 | 84.6% | 92.6% |
| 1jcfA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 45.0 | 3.84e-01 | 75.0% | 47.2% |
| 5i9eA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 45.0 | 3.57e-01 | 73.1% | 38.4% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.64 | 47.0 | 3.17e-01 | 82.7% | 19.7% |
| 3v7dD02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 48.0 | 2.90e-01 | 80.8% | 14.7% |
| 4huzA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.64 | 54.0 | 3.90e-01 | 100.0% | 91.6% |
| 4ifaA01 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.63 | 47.0 | 2.99e-01 | 80.8% | 78.5% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 51.0 | 4.28e-01 | 92.3% | 62.1% |
| 3mdqA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.63 | 44.0 | 3.05e-01 | 75.0% | 82.5% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.63 | 48.0 | 3.79e-01 | 82.7% | 53.6% |
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 48.0 | 3.78e-01 | 84.6% | 92.9% |
| 5b7gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.63 | 45.0 | 3.01e-01 | 82.7% | 17.7% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 49.0 | 3.98e-01 | 90.4% | 53.7% |
| 3gceA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.62 | 43.0 | 3.54e-01 | 75.0% | 50.0% |
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 51.0 | 4.31e-01 | 94.2% | 89.9% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.61 | 49.0 | 3.98e-01 | 92.3% | 59.5% |
| 3d4eA02 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.61 | 46.0 | 4.05e-01 | 82.7% | 67.9% |
| 1ynjJ02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.61 | 48.0 | 4.67e-01 | 94.2% | 93.5% |
| 1tqzA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 46.0 | 3.57e-01 | 84.6% | 69.9% |
| 2jvnA00 | 3.90.640.80 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.60 | 41.0 | 3.16e-01 | 82.7% | 29.4% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 45.0 | 3.34e-01 | 82.7% | 32.6% |
| 3rv0B03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 49.0 | 4.38e-01 | 94.2% | 73.4% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 44.0 | 3.11e-01 | 86.5% | 23.5% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.60 | 47.0 | 3.14e-01 | 94.2% | 37.1% |
| 2hqyA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 44.0 | 3.35e-01 | 80.8% | 36.2% |
| 6n44A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 52.0 | 3.79e-01 | 96.2% | 53.2% |
| 1fyhB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 45.0 | 3.76e-01 | 84.6% | 91.8% |
| 2plgA01 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 42.0 | 3.31e-01 | 80.8% | 33.3% |
| 4o8uA00 | 3.30.420.440 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF4152 | 0.59 | 45.0 | 2.98e-01 | 84.6% | 73.1% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.59 | 41.0 | 4.20e-01 | 78.8% | 80.4% |
| 3eagA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.58 | 49.0 | 3.18e-01 | 94.2% | 73.2% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 46.0 | 3.81e-01 | 92.3% | 77.5% |
| 3picA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 43.0 | 2.64e-01 | 82.7% | 40.3% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.58 | 45.0 | 3.45e-01 | 94.2% | 86.3% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.57 | 46.0 | 3.20e-01 | 88.5% | 70.0% |
| 4u6bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 47.0 | 2.89e-01 | 94.2% | 74.3% |
| 1e88A03 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.57 | 35.0 | 3.72e-01 | 73.1% | 71.4% |
| 6e20A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 47.0 | 3.50e-01 | 90.4% | 37.9% |
| 4mtsA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 48.0 | 3.68e-01 | 98.1% | 84.5% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 45.0 | 2.84e-01 | 96.2% | 96.8% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.57 | 46.0 | 3.99e-01 | 92.3% | 70.2% |
| 6sulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 40.0 | 3.28e-01 | 78.8% | 81.5% |
| 1rerA01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.56 | 42.0 | 3.19e-01 | 80.8% | 93.7% |
| 2rk0A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 48.0 | 3.72e-01 | 98.1% | 88.4% |
| 7yh1A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.56 | 43.0 | 3.48e-01 | 90.4% | 82.5% |
| 1qo7A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 42.0 | 2.53e-01 | 82.7% | 59.0% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.56 | 44.0 | 3.01e-01 | 94.2% | 75.6% |
| 6j7xC01 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.56 | 48.0 | 3.57e-01 | 100.0% | 62.1% |
| 3rheA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 41.0 | 3.33e-01 | 84.6% | 45.6% |
| 1vr8A00 | 3.40.1000.20 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like | 0.55 | 47.0 | 3.55e-01 | 100.0% | 57.8% |
| 1h8mA00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.55 | 47.0 | 3.50e-01 | 100.0% | 61.4% |
| 2xcmC00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 45.0 | 3.89e-01 | 100.0% | 81.5% |
| 3hi0A02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.54 | 47.0 | 3.23e-01 | 100.0% | 41.5% |
| 8gtyA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.54 | 47.0 | 3.29e-01 | 100.0% | 91.9% |
| 5llwA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 41.0 | 3.43e-01 | 82.7% | 94.6% |
| 3oyyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 43.0 | 4.06e-01 | 92.3% | 93.8% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 41.0 | 3.56e-01 | 92.3% | 67.0% |
| 1hlcA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 43.0 | 3.34e-01 | 96.2% | 63.6% |
| 6nrzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 42.0 | 3.17e-01 | 100.0% | 60.6% |
| 4qq1C03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 38.0 | 3.33e-01 | 82.7% | 87.5% |
| 1f2uB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 37.0 | 2.79e-01 | 78.8% | 35.9% |
| 5x6vF00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 44.0 | 3.47e-01 | 100.0% | 79.7% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.51 | 42.0 | 3.58e-01 | 100.0% | 58.2% |
| 3pqaB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 40.0 | 2.69e-01 | 100.0% | 67.3% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 39.0 | 3.79e-01 | 92.3% | 76.6% |
ECOD (92)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4674401 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.84 | 58.0 | 4.56e-01 | 73.1% | 36.2% |
| 4082107 | 7089.1.1.3 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › MmoD | 0.82 | 58.0 | 5.27e-01 | 75.0% | 57.1% |
| 5037858 | 2484.2.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Methylated DNA-protein cysteine methyltransferase domain › Methylated DNA-protein cysteine methyltransferase domain | 0.81 | 55.0 | 4.92e-01 | 75.0% | 52.9% |
| 4976249 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.80 | 57.0 | 4.37e-01 | 75.0% | 34.8% |
| 4999937 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.78 | 56.0 | 4.17e-01 | 75.0% | 32.0% |
| 4334411 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.77 | 68.0 | 6.34e-01 | 100.0% | 81.5% |
| 5002093 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.77 | 53.0 | 3.78e-01 | 75.0% | 25.3% |
| 5038003 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.76 | 53.0 | 5.38e-01 | 73.1% | 78.0% |
| 5062942 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.76 | 53.0 | 5.28e-01 | 75.0% | 72.7% |
| 5048073 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.75 | 65.0 | 6.11e-01 | 100.0% | 81.5% |
| 4980248 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.74 | 53.0 | 5.10e-01 | 75.0% | 69.0% |
| 3333293 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.74 | 59.0 | 5.22e-01 | 86.5% | 73.3% |
| 3974426 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.73 | 54.0 | 4.61e-01 | 78.8% | 71.8% |
| 3942742 | 2484.1.1.70 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FtsA | 0.73 | 52.0 | 3.69e-01 | 75.0% | 53.2% |
| 5060852 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.73 | 52.0 | 5.48e-01 | 75.0% | 88.9% |
| 3588181 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.73 | 61.0 | 5.46e-01 | 96.2% | 84.0% |
| 1789440 | 2484.1.1.61 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PilM_2 | 0.73 | 51.0 | 3.52e-01 | 75.0% | 50.3% |
| 5001319 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.71 | 54.0 | 3.83e-01 | 84.6% | 32.1% |
| 4963350 | 220.1.1.323 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7115 | 0.71 | 60.0 | 4.93e-01 | 98.1% | 75.0% |
| 5000498 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.71 | 62.0 | 5.93e-01 | 100.0% | 86.7% |
| 3501432 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 51.0 | 4.00e-01 | 76.9% | 47.3% |
| 3949336 | 220.1.1.216 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N | 0.70 | 60.0 | 4.79e-01 | 100.0% | 61.8% |
| 4001239 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 61.0 | 5.04e-01 | 100.0% | 93.7% |
| 3971431 | 241.11.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like | 0.70 | 48.0 | 4.14e-01 | 73.1% | 52.4% |
| 3227515 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.70 | 54.0 | 4.03e-01 | 84.6% | 69.8% |
| 5009780 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.69 | 48.0 | 3.43e-01 | 73.1% | 85.5% |
| 4150972 | 2484.1.1.11 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_L18p | 0.69 | 46.0 | 3.95e-01 | 71.2% | 92.2% |
| 5023580 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 58.0 | 5.48e-01 | 100.0% | 93.8% |
| 3710329 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 50.0 | 3.97e-01 | 78.8% | 52.7% |
| 3953894 | 7579.1.1.41 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase_PHB | 0.69 | 51.0 | 3.29e-01 | 82.7% | 27.3% |
| 5023830 | 2484.1.1.70 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FtsA | 0.69 | 47.0 | 3.26e-01 | 73.1% | 50.5% |
| 3512065 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 49.0 | 4.58e-01 | 76.9% | 76.9% |
| 3882657 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.68 | 58.0 | 4.72e-01 | 100.0% | 78.1% |
| 1746104 | 325.1.6.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › RPOC_hybrid | 0.68 | 60.0 | 4.52e-01 | 100.0% | 65.9% |
| 3088104 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.68 | 47.0 | 3.26e-01 | 73.1% | 80.1% |
| 3960994 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.68 | 50.0 | 3.12e-01 | 82.7% | 24.1% |
| 3731318 | 9.16.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 | 0.68 | 53.0 | 3.69e-01 | 84.6% | 89.7% |
| 138133 | 244.2.1.7 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C | 0.67 | 49.0 | 4.11e-01 | 82.7% | 44.9% |
| 4959499 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.67 | 49.0 | 4.03e-01 | 80.8% | 89.0% |
| 3699857 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 46.0 | 2.89e-01 | 73.1% | 31.8% |
| 3742641 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.67 | 56.0 | 4.53e-01 | 100.0% | 70.9% |
| 5032865 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.66 | 48.0 | 3.95e-01 | 82.7% | 42.6% |
| 3212138 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.65 | 50.0 | 4.40e-01 | 82.7% | 73.3% |
| 3299580 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.65 | 46.0 | 4.30e-01 | 75.0% | 60.0% |
| 3289567 | 881.1.1.15 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 | 0.65 | 49.0 | 3.64e-01 | 82.7% | 42.2% |
| 5026711 | 2484.7.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Uncharacterized protein PF2046 › Uncharacterized protein PF2046 › DUF4152 | 0.64 | 48.0 | 3.19e-01 | 80.8% | 79.6% |
| 4937908 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.64 | 54.0 | 3.98e-01 | 100.0% | 54.2% |
| 5034804 | 11.1.1.284 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 | 0.64 | 45.0 | 3.02e-01 | 75.0% | 38.0% |
| 3924881 | 206.1.1.63 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PIP49_C+PIP49_N | 0.64 | 52.0 | 3.23e-01 | 92.3% | 43.0% |
| 3222257 | 2484.1.1.109 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › bVLRF1 | 0.64 | 44.0 | 3.17e-01 | 73.1% | 65.6% |
| 3879945 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 47.0 | 4.55e-01 | 80.8% | 96.7% |
| 4030717 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.63 | 43.0 | 3.02e-01 | 73.1% | 21.2% |
| 4105274 | 2011.2.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 | 0.63 | 46.0 | 3.07e-01 | 82.7% | 18.3% |
| 3952545 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.63 | 47.0 | 4.16e-01 | 82.7% | 60.8% |
| 5021960 | 213.1.1.21 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › LPG_synthase_C | 0.63 | 46.0 | 3.46e-01 | 78.8% | 35.4% |
| 4952060 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 50.0 | 4.81e-01 | 88.5% | 78.3% |
| 4990152 | 2006.1.3.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim | 0.62 | 46.0 | 3.50e-01 | 82.7% | 33.3% |
| 4514585 | 207.6.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind+RTX_C | 0.62 | 53.0 | 3.32e-01 | 100.0% | 28.4% |
| 4056117 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.62 | 49.0 | 4.67e-01 | 94.2% | 86.2% |
| 5015845 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.61 | 50.0 | 3.58e-01 | 92.3% | 62.4% |
| 1140832 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.60 | 44.0 | 4.28e-01 | 86.5% | 71.7% |
| 4870694 | 7579.1.1.49 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › GCE_fung | 0.60 | 45.0 | 2.82e-01 | 84.6% | 47.6% |
| 3573645 | 7556.1.1.1 ↗ | a/b three-layered sandwiches › Fe-only hydrogenase › Fe-only hydrogenase › Fe-only hydrogenase › Fe_hyd_lg_C | 0.59 | 45.0 | 2.86e-01 | 84.6% | 51.0% |
| 4032204 | 2484.1.1.178 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA+FtsA | 0.59 | 53.0 | 3.14e-01 | 100.0% | 59.5% |
| 4303954 | 2484.1.1.178 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › SHS2_FTSA+FtsA | 0.59 | 52.0 | 3.08e-01 | 100.0% | 59.2% |
| 3302660 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.59 | 41.0 | 2.76e-01 | 75.0% | 18.2% |
| 3925891 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 46.0 | 4.12e-01 | 100.0% | 85.6% |
| 5014259 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.59 | 43.0 | 3.74e-01 | 80.8% | 75.3% |
| 3592277 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 44.0 | 3.10e-01 | 84.6% | 47.0% |
| 4948651 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 49.0 | 3.88e-01 | 98.1% | 75.4% |
| 4467065 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 44.0 | 2.91e-01 | 86.5% | 90.4% |
| 4366164 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.58 | 47.0 | 2.88e-01 | 100.0% | 22.6% |
| 3286713 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 43.0 | 3.07e-01 | 80.8% | 60.0% |
| 4136386 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 43.0 | 3.06e-01 | 80.8% | 55.3% |
| 5056758 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.57 | 47.0 | 3.75e-01 | 98.1% | 89.6% |
| 3502095 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.57 | 42.0 | 2.97e-01 | 82.7% | 55.6% |
| 3990244 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.56 | 47.0 | 3.67e-01 | 96.2% | 41.7% |
| 4075794 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.56 | 44.0 | 3.06e-01 | 94.2% | 71.2% |
| 3980114 | 3860.1.1.158 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › ThrE | 0.56 | 44.0 | 3.29e-01 | 90.4% | 54.7% |
| 5079671 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 49.0 | 3.86e-01 | 100.0% | 72.7% |
| 4976643 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.56 | 48.0 | 3.69e-01 | 100.0% | 77.6% |
| 4042767 | 223.1.1.103 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE7, PF30448 | 0.55 | 42.0 | 3.21e-01 | 86.5% | 74.1% |
| 5012208 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.55 | 40.0 | 3.55e-01 | 86.5% | 50.0% |
| 4251813 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.54 | 43.0 | 3.02e-01 | 96.2% | 79.0% |
| 3403732 | 2484.1.1.145 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_1_7 | 0.54 | 45.0 | 2.81e-01 | 100.0% | 26.8% |
| 5000153 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.54 | 40.0 | 3.46e-01 | 80.8% | 75.9% |
| 4944850 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 39.0 | 2.86e-01 | 82.7% | 31.2% |
| 4135248 | 10.1.1.4 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin | 0.54 | 44.0 | 3.42e-01 | 96.2% | 66.2% |
| 3589304 | 331.23.1.0 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain | 0.54 | 38.0 | 3.42e-01 | 75.0% | 74.7% |
| 3982278 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.52 | 43.0 | 3.70e-01 | 98.1% | 96.7% |
| 2589440 | 4036.1.1.1 ↗ | a+b two layers › Insertion domain in adenylylcyclase toxin (the edema factor) › Insertion domain in adenylylcyclase toxin (the edema factor) › Insertion domain in adenylylcyclase toxin (the edema factor) › Anthrax_toxA | 0.51 | 40.0 | 3.08e-01 | 86.5% | 90.6% |
| 3777525 | 2004.1.1.230 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Tsr1_G-like | 0.51 | 44.0 | 3.04e-01 | 100.0% | 72.3% |