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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00067
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00067
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-183
Domain cluster:
rep: JGI24723J26617_10000007_prodigal-single.1__X__X__00027__D13-146
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wfxA02 | 3.20.170.30 | Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › | 0.84 | 47.0 | 6.31e-01 | 75.3% | 100.0% |
| 1x2nA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 25.0 | 4.28e-01 | 96.9% | 83.3% |
| 1rr7A02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 19.0 | 3.74e-01 | 93.8% | 85.4% |
| 2x5yA00 | 3.90.228.10 | Alpha Beta › Alpha-Beta Complex › Phosphoenolpyruvate Carboxykinase; domain 3 › | 0.63 | 43.0 | 4.25e-01 | 74.1% | 65.5% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 24.0 | 3.48e-01 | 90.7% | 73.7% |
| 3dteA02 | 1.10.10.1030 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain | 0.63 | 19.0 | 3.56e-01 | 92.0% | 100.0% |
| 3al0B03 | 1.10.10.410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 23.0 | 3.52e-01 | 94.4% | 87.3% |
| 2cobA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 18.0 | 3.33e-01 | 96.3% | 95.5% |
| 4eqqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 17.0 | 3.10e-01 | 90.7% | 87.5% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 20.0 | 2.61e-01 | 99.4% | 53.2% |
| 1fcdC01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.51 | 25.0 | 3.47e-01 | 91.4% | 96.2% |
| 7z7vE01 | 1.10.10.1590 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E | 0.51 | 19.0 | 3.06e-01 | 93.2% | 91.7% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.50 | 21.0 | 3.00e-01 | 89.5% | 80.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3825697 | 101.1.1.253 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_CLF_N | 0.71 | 23.0 | 4.12e-01 | 97.5% | 89.1% |
| 3783338 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 20.0 | 3.78e-01 | 95.1% | 91.1% |
| 4009872 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.65 | 19.0 | 3.21e-01 | 96.9% | 71.7% |
| 3190018 | 101.1.1.201 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Bot1p | 0.64 | 20.0 | 2.87e-01 | 96.9% | 56.2% |
| 3268811 | 237.1.1.1 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › PARP | 0.63 | 45.0 | 4.08e-01 | 73.5% | 60.7% |
| 4627768 | 101.1.2.786 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_1 | 0.61 | 16.0 | 3.28e-01 | 94.4% | 92.5% |
| 3240446 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 19.0 | 3.30e-01 | 90.1% | 83.6% |
| 4626289 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.59 | 18.0 | 2.77e-01 | 96.3% | 63.1% |
| 3613957 | 102.1.1.32 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_9 | 0.57 | 25.0 | 3.58e-01 | 92.6% | 88.0% |
| 4664974 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.55 | 26.0 | 3.61e-01 | 99.4% | 97.1% |
| 5025805 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 18.0 | 3.16e-01 | 95.7% | 90.9% |
| None | — | 0.52 | 25.0 | 3.34e-01 | 99.4% | 87.5% | |
| 5079886 | 159.1.1.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 | 0.51 | 21.0 | 3.02e-01 | 92.0% | 81.3% |