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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00084

Bact-Vir

SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00084

Identity

Kingdom:
phage

Quality

63.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-52
PDB
D2 high residues 80-127
PDB
D3 high residues 138-279
PDB
Domain cluster: rep: JGI24723J26617_10000007_prodigal-single.1__X__X__00027__D13-146
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2auaA01 3.20.170.10 Alpha Beta › Alpha-Beta Barrel › ADP-ribosylation fold › ADP-ribosylation domain 0.65 44.0 4.91e-01 78.2% 88.9%
2vugA05 3.30.70.3360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 21.0 3.23e-01 79.6% 100.0%
2vs7A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 27.0 3.47e-01 71.8% 91.0%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3953513 237.1.1.9 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF952 0.80 55.0 6.09e-01 75.4% 87.0%
3256269 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.75 52.0 6.00e-01 75.4% 95.2%
3735675 237.1.1.36 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › DUF7587 0.71 52.0 5.20e-01 75.4% 98.6%
4995698 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.63 43.0 5.10e-01 73.9% 99.0%
5069300 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.52 30.0 3.49e-01 85.2% 77.1%
3400190 101.1.2.24 ↗ alpha arrays › HTH › HTH › winged helix domain › MAGE 0.50 37.0 3.91e-01 95.8% 85.4%