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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00127
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00127
Identity
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-122
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ml0B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.81 | 67.0 | 7.05e-01 | 91.2% | 98.9% |
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.81 | 60.0 | 6.46e-01 | 84.3% | 90.8% |
| 7bwfA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.80 | 63.0 | 6.83e-01 | 91.2% | 97.7% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.80 | 64.0 | 6.91e-01 | 92.2% | 100.0% |
| 6n90A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.79 | 64.0 | 6.89e-01 | 87.3% | 100.0% |
| 1xqbA02 | 3.30.2310.10 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › YaeB-like | 0.78 | 43.0 | 4.89e-01 | 82.4% | 72.4% |
| 5cw7B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.77 | 67.0 | 6.99e-01 | 98.0% | 98.9% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.76 | 61.0 | 6.54e-01 | 88.2% | 97.7% |
| 5cegD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.75 | 63.0 | 6.42e-01 | 89.2% | 98.0% |
| 4mcxF00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.74 | 59.0 | 6.18e-01 | 83.3% | 100.0% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.73 | 59.0 | 6.30e-01 | 91.2% | 98.9% |
| 3zyyX03 | 3.10.20.880 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.68 | 31.0 | 3.37e-01 | 83.3% | 48.3% |
| 2joiA00 | 3.30.310.190 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.55 | 34.0 | 3.50e-01 | 78.4% | 63.5% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.55 | 30.0 | 3.78e-01 | 92.2% | 94.6% |
| 4j87A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 39.0 | 2.75e-01 | 73.5% | 38.6% |
| 4i9xA00 | 2.60.40.3790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 3.43e-01 | 82.4% | 64.2% |
| 1e2rA02 | 2.140.10.20 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 0.53 | 40.0 | 2.69e-01 | 79.4% | 45.6% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 37.0 | 2.60e-01 | 71.6% | 29.9% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 42.0 | 2.79e-01 | 85.3% | 33.6% |
| 3aiiA02 | 2.40.240.100 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.52 | 29.0 | 3.49e-01 | 83.3% | 84.4% |
| 2z0qA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 43.0 | 3.98e-01 | 91.2% | 82.0% |
| 2vrwB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 40.0 | 3.83e-01 | 93.1% | 71.9% |
| 2dt8A02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.51 | 29.0 | 2.66e-01 | 72.5% | 43.1% |
| 5x6vG00 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 43.0 | 4.01e-01 | 96.1% | 87.1% |
| 2wiqA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.50 | 39.0 | 3.06e-01 | 83.3% | 48.9% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 32.0 | 3.41e-01 | 94.1% | 75.0% |
ECOD (71)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940748 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.86 | 66.0 | 7.29e-01 | 96.1% | 97.6% |
| 5075086 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.85 | 63.0 | 7.07e-01 | 87.3% | 98.8% |
| 5032565 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.84 | 65.0 | 7.07e-01 | 85.3% | 96.5% |
| 5080208 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.84 | 68.0 | 7.20e-01 | 95.1% | 96.7% |
| 5027803 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 62.0 | 6.93e-01 | 88.2% | 100.0% |
| 4967379 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.83 | 64.0 | 6.99e-01 | 86.3% | 97.6% |
| 2807914 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.82 | 65.0 | 6.91e-01 | 86.3% | 94.4% |
| 5080337 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.82 | 66.0 | 7.02e-01 | 93.1% | 96.6% |
| 4937762 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.82 | 67.0 | 7.14e-01 | 92.2% | 97.8% |
| 3604507 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.82 | 70.0 | 7.29e-01 | 100.0% | 97.9% |
| 5005256 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.82 | 64.0 | 6.95e-01 | 87.3% | 97.6% |
| 4984297 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 64.0 | 6.82e-01 | 89.2% | 93.3% |
| 169853 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 64.0 | 7.01e-01 | 92.2% | 100.0% |
| 5031302 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.81 | 67.0 | 6.69e-01 | 87.3% | 99.0% |
| 1297412 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.81 | 67.0 | 7.03e-01 | 91.2% | 97.8% |
| 5062498 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.81 | 64.0 | 6.92e-01 | 87.3% | 98.8% |
| 4937366 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.81 | 70.0 | 7.30e-01 | 100.0% | 100.0% |
| 2629016 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.80 | 63.0 | 6.83e-01 | 91.2% | 97.7% |
| 4959351 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.79 | 59.0 | 6.60e-01 | 95.1% | 100.0% |
| 2549544 | 4312.1.1.6 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YoeB_toxin | 0.79 | 64.0 | 6.89e-01 | 87.3% | 100.0% |
| 3165472 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.79 | 62.0 | 6.46e-01 | 83.3% | 93.7% |
| 1877168 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.79 | 67.0 | 7.03e-01 | 95.1% | 98.9% |
| 5065653 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.78 | 65.0 | 6.43e-01 | 87.3% | 98.1% |
| 4966797 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.78 | 59.0 | 6.41e-01 | 85.3% | 95.3% |
| 5044967 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.78 | 63.0 | 6.67e-01 | 95.1% | 96.7% |
| 4950220 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.78 | 63.0 | 6.71e-01 | 92.2% | 97.8% |
| 5018712 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.78 | 63.0 | 6.70e-01 | 92.2% | 97.8% |
| 4646165 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.77 | 64.0 | 6.78e-01 | 86.3% | 97.8% |
| 5027871 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.77 | 65.0 | 6.77e-01 | 92.2% | 97.8% |
| 2966315 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.77 | 64.0 | 6.69e-01 | 88.2% | 95.8% |
| 5007067 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.77 | 63.0 | 6.65e-01 | 86.3% | 97.8% |
| 4585524 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.76 | 62.0 | 6.63e-01 | 86.3% | 98.9% |
| 4948982 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.76 | 62.0 | 6.56e-01 | 91.2% | 97.8% |
| 3955980 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.76 | 68.0 | 6.82e-01 | 100.0% | 94.3% |
| 5016951 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.76 | 63.0 | 6.54e-01 | 95.1% | 95.8% |
| 2770566 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.75 | 61.0 | 6.37e-01 | 85.3% | 96.8% |
| 4937462 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.75 | 64.0 | 6.65e-01 | 92.2% | 97.9% |
| 4937915 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.75 | 67.0 | 6.79e-01 | 100.0% | 100.0% |
| 5012352 | 4312.1.1.15 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 | 0.74 | 53.0 | 5.80e-01 | 88.2% | 89.4% |
| 4544637 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.73 | 62.0 | 6.45e-01 | 95.1% | 97.8% |
| 4940076 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.73 | 67.0 | 6.47e-01 | 100.0% | 94.8% |
| 2832769 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.73 | 67.0 | 6.35e-01 | 100.0% | 88.4% |
| 166546 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.73 | 59.0 | 6.30e-01 | 91.2% | 98.9% |
| 1124757 | 4312.1.1.2 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB-like_toxin | 0.73 | 58.0 | 6.04e-01 | 85.3% | 100.0% |
| 4937945 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.72 | 66.0 | 6.65e-01 | 100.0% | 98.1% |
| 3982278 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.72 | 60.0 | 6.31e-01 | 91.2% | 100.0% |
| 5029970 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.72 | 63.0 | 6.46e-01 | 99.0% | 98.0% |
| 5051338 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.71 | 66.0 | 5.59e-01 | 100.0% | 67.7% |
| 3526903 | 4312.2.1.0 ↗ | a+b two layers › RelE-like › YaeB-like › YaeB-like | 0.68 | 55.0 | 5.58e-01 | 85.3% | 88.9% |
| 3785321 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 50.0 | 5.03e-01 | 99.0% | 83.0% |
| 3844416 | 5.1.4.229 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_EMC1_N | 0.62 | 43.0 | 2.91e-01 | 72.5% | 29.5% |
| 5022885 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.58 | 41.0 | 2.68e-01 | 73.5% | 24.4% |
| 5045692 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 42.0 | 2.92e-01 | 75.5% | 32.9% |
| 3784764 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.57 | 39.0 | 2.73e-01 | 70.6% | 38.3% |
| 3239417 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.57 | 45.0 | 4.18e-01 | 88.2% | 87.4% |
| 3717696 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 40.0 | 2.69e-01 | 73.5% | 30.5% |
| 4405198 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 39.0 | 2.68e-01 | 73.5% | 41.3% |
| 3813321 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.55 | 38.0 | 2.70e-01 | 71.6% | 40.6% |
| 3218497 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.55 | 38.0 | 2.69e-01 | 71.6% | 31.1% |
| 3506771 | 5.1.5.75 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 | 0.55 | 38.0 | 2.66e-01 | 70.6% | 28.7% |
| None | — | 0.54 | 37.0 | 2.84e-01 | 70.6% | 42.6% | |
| 3641304 | 5.1.5.75 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 | 0.54 | 38.0 | 3.22e-01 | 74.5% | 71.1% |
| 3219070 | 5.1.3.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40 | 0.53 | 37.0 | 2.32e-01 | 71.6% | 18.2% |
| 3695012 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 36.0 | 2.47e-01 | 71.6% | 25.1% |
| 3789364 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 44.0 | 2.98e-01 | 92.2% | 35.3% |
| 3747619 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 37.0 | 2.57e-01 | 74.5% | 42.7% |
| 4569253 | 5.1.2.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BMT | 0.51 | 44.0 | 2.92e-01 | 96.1% | 88.6% |
| 1512998 | 3953.1.1.1 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3_N | 0.51 | 35.0 | 3.74e-01 | 96.1% | 83.5% |
| 3574696 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.51 | 35.0 | 2.41e-01 | 71.6% | 29.5% |
| 5078315 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.50 | 42.0 | 2.65e-01 | 94.1% | 52.0% |
| 1649977 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.50 | 32.0 | 3.39e-01 | 94.1% | 73.3% |