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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00205
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00205
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-110
Domain cluster:
rep: SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00086__D1-125
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3wkmB01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.54 | 37.0 | 3.78e-01 | 87.0% | 73.4% |
| 3wy7D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 31.0 | 2.91e-01 | 100.0% | 50.8% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3531322 | 101.1.2.564 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27514 | 0.56 | 31.0 | 3.71e-01 | 93.0% | 81.5% |
| 3905834 | 148.1.3.243 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › GREB1_2nd | 0.54 | 43.0 | 3.45e-01 | 87.0% | 92.7% |
| 5054002 | 305.1.1.2 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L_2 | 0.51 | 33.0 | 3.64e-01 | 100.0% | 81.2% |
| 5029634 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.51 | 38.0 | 3.78e-01 | 78.0% | 88.6% |
| 4302784 | 3351.1.1.0 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 | 0.51 | 39.0 | 4.00e-01 | 81.0% | 97.9% |
| 3833177 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.51 | 39.0 | 3.23e-01 | 83.0% | 84.3% |
| 4873112 | 3016.1.1.11 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA | 0.51 | 44.0 | 3.38e-01 | 96.0% | 81.2% |
| 5047428 | 7577.1.1.5 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › SHMT | 0.51 | 44.0 | 2.90e-01 | 97.0% | 46.7% |
| 5047870 | 281.1.1.2 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › ThiP_synth | 0.51 | 44.0 | 3.73e-01 | 100.0% | 82.9% |
| 3959300 | 7577.1.1.11 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › SelA | 0.50 | 44.0 | 3.17e-01 | 97.0% | 61.7% |
| 5000761 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 39.0 | 3.54e-01 | 83.0% | 91.9% |
| 3286992 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.50 | 40.0 | 3.38e-01 | 87.0% | 67.1% |