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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00231
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00231
Identity
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-145
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6ynwH01 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.63 | 25.0 | 3.39e-01 | 73.6% | 67.6% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 28.0 | 3.21e-01 | 78.5% | 59.3% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.53 | 25.0 | 2.88e-01 | 86.8% | 58.1% |
| 3rmiA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.50 | 28.0 | 3.27e-01 | 95.8% | 75.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3798232 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.58 | 27.0 | 3.33e-01 | 79.2% | 68.2% |
| 4948274 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.50 | 26.0 | 3.49e-01 | 70.1% | 94.7% |
D2
high
residues 158-259
Domain cluster:
rep: Salt_Pond_R2_C_D2_MG_scaffold_7_prodigal-single.1__X__X__00234__D180-301
D3
high
residues 265-392