SR-VP_0-2_scaffold_141_2510002_prodigal-single.1XX__00288

Bact-Vir

SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00288

Identity

75.1 mean pLDDT

Singleton — not in a non-trivial cluster

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-61

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2nn6G03	3.30.1370.10	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1	0.56	30.0	2.63e-01	77.2%	28.4%
1e3hA03	3.30.230.70	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain	0.54	44.0	3.14e-01	100.0%	78.4%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3972988	304.28.1.0 ↗	a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain	0.55	39.0	3.32e-01	77.2%	46.0%
5063453	304.102.1.7 ↗	a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C	0.54	43.0	2.83e-01	86.0%	83.3%
5055164	5103.1.1.0 ↗	a/b three-layered sandwiches › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380 › Insert domain in hypothetical protein PF0380	0.53	37.0	3.14e-01	77.2%	42.9%
4109595	314.1.1.3 ↗	a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d	0.52	44.0	2.81e-01	89.5%	48.2%
3446878	3016.1.1.0 ↗	a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases	0.52	37.0	3.20e-01	77.2%	52.6%