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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00327
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00327
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-63
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 47.0 | 4.31e-01 | 100.0% | 95.5% |
| 3p5jB01 | 2.20.25.530 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 41.0 | 3.66e-01 | 83.0% | 89.2% |
| 2oqtD00 | 3.40.930.10 | Alpha Beta › 3-Layer(aba) Sandwich › Mannitol-specific EII; Chain A › Mannitol-specific EII; Chain A | 0.55 | 45.0 | 3.24e-01 | 97.9% | 64.7% |
| 4lusB01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.54 | 47.0 | 3.32e-01 | 100.0% | 43.6% |
| 5zl6A01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.54 | 47.0 | 3.30e-01 | 100.0% | 43.7% |
| 1fm2B03 | 2.30.120.10 | Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region | 0.53 | 37.0 | 3.40e-01 | 76.6% | 69.7% |
| 5yycA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.53 | 46.0 | 3.32e-01 | 100.0% | 48.9% |
| 2ogjA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.50 | 42.0 | 3.22e-01 | 100.0% | 39.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3449134 | 59.1.2.2 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › Ydr279_N | 0.64 | 46.0 | 3.96e-01 | 100.0% | 47.5% |
| 3023952 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 3.34e-01 | 100.0% | 33.6% |
| 4044404 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.58 | 46.0 | 3.80e-01 | 100.0% | 92.4% |
| 4098901 | 1.1.7.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C | 0.53 | 46.0 | 3.21e-01 | 100.0% | 42.6% |
| 4609381 | 1.1.7.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C | 0.52 | 44.0 | 3.16e-01 | 100.0% | 45.5% |
| 3587268 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 35.0 | 2.75e-01 | 100.0% | 28.3% |
| 3681799 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.51 | 44.0 | 2.85e-01 | 100.0% | 22.2% |
| 3782181 | 109.50.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Pre-mRNA-splicing factor 38A › Pre-mRNA-splicing factor 38A › PRP38 | 0.51 | 45.0 | 2.98e-01 | 100.0% | 31.7% |
| 2979122 | 3174.1.1.1 ↗ | beta barrels › Ribosomal protein L14-like › Ribosomal protein L14-related › Ribosomal protein L14-related › Ribosomal_L14 | 0.50 | 43.0 | 3.26e-01 | 100.0% | 39.7% |
| 3215385 | 2.18.1.0 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins | 0.50 | 42.0 | 3.86e-01 | 100.0% | 92.3% |