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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00341

Bact-Vir

SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00341

Identity

Kingdom:
phage

Quality

59.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 306-430
PDB
D2 medium residues 1-72
PDB
D3 medium residues 73-86_141-197_243-260
PDB
D4 medium residues 87-140_198-242_261-293
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b8eB00 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.69 54.0 4.66e-01 81.1% 81.2%
3sh4A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 4.20e-01 97.0% 90.3%
5gm0A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 4.37e-01 92.4% 96.6%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.50 30.0 3.14e-01 97.7% 62.7%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3725581 10.1.1.8 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY 0.62 57.0 4.78e-01 100.0% 91.2%
3277345 7512.1.1.4 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_10 0.53 47.0 3.34e-01 98.5% 44.5%
3656014 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 42.0 3.86e-01 84.8% 97.7%
3246038 10.1.1.4 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Gal-bind_lectin 0.53 47.0 4.50e-01 94.7% 93.2%