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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00358
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00358
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-146
Domain cluster:
rep: KY629563.1__ARK07518.1__LAV_00143__00118__D6-135
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kf6A04 | 4.10.80.40 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › succinate dehydrogenase protein domain | 0.66 | 18.0 | 3.71e-01 | 72.7% | 100.0% |
| 4atnA02 | 3.30.2300.20 | Alpha Beta › 2-Layer Sandwich › THUMP fold › | 0.51 | 28.0 | 3.41e-01 | 95.1% | 80.2% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034385 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.54 | 26.0 | 2.98e-01 | 80.4% | 60.9% |
| 4357501 | 4143.1.1.5 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › RLMM_N | 0.53 | 29.0 | 3.42e-01 | 95.1% | 76.8% |
| 4162803 | 159.1.2.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › PRA-PH | 0.52 | 35.0 | 4.02e-01 | 97.2% | 93.3% |
| 4222853 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 27.0 | 2.99e-01 | 81.1% | 63.5% |
| 5041912 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.51 | 42.0 | 3.21e-01 | 90.2% | 83.6% |