←Back to structures
SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00411
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00411
Identity
- Kingdom:
- phage
Quality
67.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 29-158
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7zhhA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 35.0 | 4.61e-01 | 72.3% | 100.0% |
| 2k5nA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 37.0 | 4.77e-01 | 83.1% | 100.0% |
| 4dapA01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.57 | 34.0 | 4.11e-01 | 91.5% | 95.0% |
| 7c9rH01 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.51 | 33.0 | 3.23e-01 | 73.8% | 58.1% |
| 2qw7C00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.51 | 32.0 | 3.64e-01 | 73.8% | 86.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4473605 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.65 | 32.0 | 3.97e-01 | 73.1% | 73.5% |
| 3889662 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 33.0 | 4.41e-01 | 72.3% | 95.4% |
| 3702234 | 2.1.1.3 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD | 0.62 | 38.0 | 4.69e-01 | 92.3% | 100.0% |
| 3387984 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 32.0 | 3.90e-01 | 74.6% | 77.6% |
| 3233742 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 34.0 | 3.95e-01 | 74.6% | 77.8% |
| 3387924 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 35.0 | 4.08e-01 | 73.8% | 81.1% |
| 4980465 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 33.0 | 3.88e-01 | 83.8% | 86.7% |
| 3289194 | 227.1.1.16 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PF26572 | 0.55 | 42.0 | 4.39e-01 | 80.8% | 93.0% |
| 4948490 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 29.0 | 3.62e-01 | 79.2% | 89.3% |