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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00472
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00472
Identity
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-73
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t3uA01 | 3.30.160.880 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Cell division protein ZapA protomer, N-terminal domain | 0.59 | 28.0 | 3.54e-01 | 80.0% | 74.4% |
| 7oiyA01 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 45.0 | 3.25e-01 | 100.0% | 81.9% |
| 3lerA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 43.0 | 2.93e-01 | 92.9% | 96.0% |
| 2vqxA01 | 3.10.170.10 | Alpha Beta › Roll › Elastase; domain 1 › | 0.50 | 34.0 | 2.69e-01 | 71.4% | 47.7% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036691 | 242.2.1.2 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N | 0.59 | 49.0 | 4.76e-01 | 100.0% | 83.7% |
| 4989157 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.57 | 42.0 | 3.76e-01 | 78.6% | 94.0% |
| 1676534 | 633.26.1.1 ↗ | alpha bundles › Bromodomain-like › SidC lipid-binding domain › SidC lipid-binding domain › SidC_lipid-bd | 0.57 | 42.0 | 3.42e-01 | 78.6% | 74.2% |
| 5079062 | 242.2.1.2 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N | 0.53 | 43.0 | 4.22e-01 | 100.0% | 82.5% |
| 3868746 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.52 | 36.0 | 2.44e-01 | 75.7% | 82.8% |
| 4045754 | 110.1.1.18 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death_Lrrd1 | 0.51 | 39.0 | 3.55e-01 | 88.6% | 95.2% |
| 3965475 | 4014.1.1.1 ↗ | a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV | 0.50 | 37.0 | 2.69e-01 | 78.6% | 98.5% |