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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00487
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00487
Identity
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-69
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1eazA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.74 | 57.0 | 4.63e-01 | 83.9% | 66.0% |
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.70 | 44.0 | 5.04e-01 | 92.9% | 92.3% |
| 2dk7A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.67 | 43.0 | 3.98e-01 | 96.4% | 50.7% |
| 3le4A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.66 | 40.0 | 4.11e-01 | 91.1% | 61.8% |
| 2lezA00 | 3.30.2450.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 | 0.66 | 49.0 | 3.89e-01 | 82.1% | 42.5% |
| 3c5mA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 56.0 | 3.41e-01 | 100.0% | 15.2% |
| 2r0cA03 | 3.40.30.120 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.64 | 47.0 | 3.78e-01 | 80.4% | 66.4% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.63 | 43.0 | 4.55e-01 | 71.4% | 100.0% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 45.0 | 4.34e-01 | 89.3% | 68.2% |
| 3ottB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 53.0 | 3.35e-01 | 100.0% | 23.1% |
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.61 | 40.0 | 3.88e-01 | 92.9% | 58.7% |
| 2ysiA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.61 | 36.0 | 4.21e-01 | 91.1% | 97.0% |
| 1hyrC01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.61 | 47.0 | 3.34e-01 | 85.7% | 88.3% |
| 2wozA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.60 | 51.0 | 3.24e-01 | 100.0% | 27.0% |
| 2kxqA01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.60 | 35.0 | 3.90e-01 | 87.5% | 100.0% |
| 1xezA01 | 3.30.110.130 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hemolytic toxin, N-terminal domain | 0.59 | 45.0 | 3.96e-01 | 82.1% | 95.1% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 49.0 | 4.94e-01 | 100.0% | 94.7% |
| 6qp7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 51.0 | 3.01e-01 | 100.0% | 20.4% |
| 2r19A00 | 2.60.450.10 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain | 0.58 | 51.0 | 3.85e-01 | 100.0% | 43.0% |
| 3ii7A00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.58 | 49.0 | 3.19e-01 | 100.0% | 28.8% |
| 2lw7A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.57 | 48.0 | 3.88e-01 | 96.4% | 78.1% |
| 2rsmA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 47.0 | 3.79e-01 | 94.6% | 52.2% |
| 1atiB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.57 | 47.0 | 3.85e-01 | 96.4% | 88.4% |
| 4l8nA03 | 3.30.160.670 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 44.0 | 3.38e-01 | 96.4% | 75.6% |
| 4a2lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 49.0 | 3.09e-01 | 100.0% | 23.3% |
| 4f03A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 41.0 | 3.47e-01 | 82.1% | 93.3% |
| 4kc5D02 | 3.30.70.3290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 3.30e-01 | 85.7% | 50.4% |
| 3draB00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.54 | 38.0 | 2.39e-01 | 76.8% | 22.3% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 43.0 | 3.78e-01 | 91.1% | 73.9% |
| 2vpjA00 | 2.120.10.80 | Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller | 0.53 | 43.0 | 2.86e-01 | 100.0% | 29.4% |
| 3m7aA01 | 2.60.120.1140 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 | 0.53 | 37.0 | 2.89e-01 | 75.0% | 90.4% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 36.0 | 3.12e-01 | 83.9% | 41.4% |
| 1e5dA02 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 43.0 | 2.89e-01 | 96.4% | 89.5% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 42.0 | 3.63e-01 | 96.4% | 80.4% |
| 1ntvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.18e-01 | 96.4% | 66.4% |
| 2g5xA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.52 | 42.0 | 3.02e-01 | 92.9% | 59.3% |
| 3vz9B00 | 3.30.457.50 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 | 0.51 | 42.0 | 3.59e-01 | 100.0% | 68.9% |
| 3ruiA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 37.0 | 2.42e-01 | 83.9% | 36.0% |
| 6whjD00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 44.0 | 2.83e-01 | 98.2% | 36.5% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.50 | 35.0 | 2.81e-01 | 75.0% | 46.1% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5079258 | 7089.1.1.0 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD | 0.80 | 58.0 | 6.36e-01 | 82.1% | 95.6% |
| 3881195 | 220.1.1.145 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RASGAP | 0.79 | 61.0 | 5.55e-01 | 83.9% | 65.3% |
| 3527580 | 220.1.1.145 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RASGAP | 0.76 | 59.0 | 6.01e-01 | 83.9% | 89.1% |
| 3874221 | 220.1.1.145 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RASGAP | 0.75 | 58.0 | 4.87e-01 | 83.9% | 62.1% |
| 3624619 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.70 | 54.0 | 4.15e-01 | 85.7% | 39.2% |
| 3482775 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.66 | 42.0 | 4.58e-01 | 92.9% | 80.0% |
| None | — | 0.66 | 50.0 | 3.37e-01 | 80.4% | 83.6% | |
| 3779483 | 5.1.4.136 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ig_3 | 0.66 | 56.0 | 3.27e-01 | 96.4% | 16.9% |
| 3684267 | 5.1.10.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › RPE65 | 0.65 | 56.0 | 4.36e-01 | 100.0% | 46.2% |
| 4965851 | 4100.1.1.9 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 | 0.64 | 46.0 | 4.64e-01 | 82.1% | 76.4% |
| 5081581 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.64 | 54.0 | 3.64e-01 | 100.0% | 36.5% |
| 5014318 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 50.0 | 4.60e-01 | 87.5% | 65.3% |
| 5077629 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 43.0 | 4.73e-01 | 71.4% | 93.3% |
| 3174350 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 50.0 | 4.80e-01 | 91.1% | 96.9% |
| 4969964 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 54.0 | 4.55e-01 | 98.2% | 93.7% |
| 3805299 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.60 | 51.0 | 3.28e-01 | 100.0% | 26.1% |
| 3913579 | 386.1.1.279 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF27065 | 0.60 | 48.0 | 4.83e-01 | 100.0% | 92.7% |
| 3939977 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 45.0 | 4.49e-01 | 98.2% | 80.0% |
| 5072382 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 48.0 | 4.04e-01 | 94.6% | 84.5% |
| 3391302 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 50.0 | 3.21e-01 | 100.0% | 27.3% |
| None | — | 0.59 | 47.0 | 3.15e-01 | 89.3% | 32.4% | |
| 4510149 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 50.0 | 4.18e-01 | 98.2% | 90.0% |
| 2507075 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.58 | 48.0 | 4.17e-01 | 91.1% | 94.1% |
| 3486061 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 50.0 | 3.34e-01 | 98.2% | 34.7% |
| 5065150 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 49.0 | 4.04e-01 | 96.4% | 83.8% |
| 4193132 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 49.0 | 4.07e-01 | 96.4% | 90.0% |
| 3937685 | 708.1.2.7 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › RIG-I_C-RD | 0.58 | 44.0 | 3.27e-01 | 83.9% | 84.1% |
| 3597599 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.57 | 49.0 | 4.13e-01 | 100.0% | 93.0% |
| 4297095 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 50.0 | 4.10e-01 | 100.0% | 84.8% |
| 3193334 | 5.1.5.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Rax2 | 0.56 | 45.0 | 2.74e-01 | 100.0% | 19.8% |
| 3442609 | 387.1.1.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related | 0.56 | 45.0 | 4.47e-01 | 92.9% | 95.0% |
| 3386379 | 3523.1.1.2 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptD_N | 0.56 | 50.0 | 3.80e-01 | 100.0% | 45.4% |
| 5070992 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.56 | 40.0 | 4.01e-01 | 83.9% | 76.7% |
| 3262212 | 7502.1.1.7 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon2 | 0.55 | 46.0 | 3.79e-01 | 96.4% | 79.1% |
| 3398775 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.55 | 37.0 | 4.08e-01 | 78.6% | 100.0% |
| 3944588 | 241.1.1.9 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF3156 | 0.54 | 44.0 | 3.31e-01 | 100.0% | 80.6% |
| 4959386 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 36.0 | 3.75e-01 | 73.2% | 84.0% |
| 4121075 | 298.4.1.3 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › HrpE | 0.53 | 38.0 | 2.73e-01 | 82.1% | 40.0% |
| 4986272 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 36.0 | 3.67e-01 | 75.0% | 74.5% |
| 3688692 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.52 | 36.0 | 2.48e-01 | 76.8% | 33.6% |
| 4527656 | 298.4.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E | 0.51 | 37.0 | 2.99e-01 | 82.1% | 61.5% |
| 4992543 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 35.0 | 3.59e-01 | 75.0% | 78.2% |
| 4475546 | 298.4.1.1 ↗ | a+b two layers › FwdE/GAPDH domain-like › V-type ATPase subunit E › V-type ATPase subunit E › vATP-synt_E | 0.50 | 35.0 | 2.66e-01 | 73.2% | 53.1% |
D2
high
residues 73-129
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 52.0 | 4.85e-01 | 89.5% | 98.6% |
| 2o35A00 | 1.10.3340.10 | Mainly Alpha › Orthogonal Bundle › SMc04008-like fold › SMc04008-like | 0.65 | 51.0 | 4.63e-01 | 87.7% | 91.1% |
| 4evfA01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.65 | 53.0 | 4.96e-01 | 91.2% | 97.2% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 45.0 | 4.66e-01 | 89.5% | 83.3% |
| 6xiuA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 46.0 | 3.95e-01 | 86.0% | 56.4% |
| 2jrtA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 50.0 | 4.48e-01 | 96.5% | 72.1% |
| 3ab3D00 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.59 | 44.0 | 3.19e-01 | 80.7% | 93.3% |
| 3oioA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 48.0 | 3.86e-01 | 89.5% | 79.5% |
| 1yhuB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 46.0 | 3.52e-01 | 89.5% | 59.7% |
| 1uz3B00 | 1.10.1240.40 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › ENT domain | 0.58 | 50.0 | 4.23e-01 | 98.2% | 81.4% |
| 2g31A01 | 1.20.5.2480 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.57 | 37.0 | 3.83e-01 | 77.2% | 72.2% |
| 4fe7A03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 48.0 | 3.88e-01 | 94.7% | 80.7% |
| 1x9fA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.56 | 44.0 | 3.49e-01 | 98.2% | 59.2% |
| 1sy7A02 | 1.20.1370.20 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › Catalase, four-helical domain | 0.53 | 38.0 | 3.74e-01 | 82.5% | 71.9% |
| 4hg2A02 | 1.10.10.2560 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 41.0 | 3.92e-01 | 96.5% | 72.1% |
| 2kvcA01 | 1.10.150.430 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF3349, helical bundle | 0.53 | 41.0 | 3.67e-01 | 89.5% | 69.3% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.02e-01 | 89.5% | 41.1% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.53e-01 | 87.7% | 63.2% |
| 1o0sA02 | 1.20.1370.30 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › | 0.51 | 41.0 | 3.52e-01 | 100.0% | 61.1% |
| 3eoqB02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 37.0 | 2.72e-01 | 80.7% | 76.5% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 37.0 | 3.28e-01 | 84.2% | 61.7% |
| 2dn0A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.50 | 34.0 | 3.18e-01 | 71.9% | 59.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3414130 | 109.4.1.1637 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › U3_assoc_6, UTP6_C | 0.73 | 64.0 | 3.65e-01 | 100.0% | 17.0% |
| 3899442 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 52.0 | 3.86e-01 | 94.7% | 64.4% |
| 3211048 | 611.3.1.4 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Pes-10 | 0.63 | 53.0 | 4.59e-01 | 96.5% | 67.0% |
| 3648943 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.62 | 49.0 | 3.71e-01 | 93.0% | 40.6% |
| 4032384 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.61 | 46.0 | 4.22e-01 | 86.0% | 91.3% |
| 4409479 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.59 | 48.0 | 3.91e-01 | 93.0% | 67.8% |
| 3331810 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.58 | 41.0 | 3.84e-01 | 80.7% | 98.8% |
| 4263217 | 109.47.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical C-terminal domain in magnesium chelatase catalytic subunit › Helical C-terminal domain in magnesium chelatase catalytic subunit › CobN-Mg_chel | 0.57 | 47.0 | 3.90e-01 | 100.0% | 100.0% |
| 3188777 | 1106.1.1.1 ↗ | alpha arrays › RDS3 complex subunit 10 › RDS3 complex subunit 10 › RDS3 complex subunit 10 › SF3b10 | 0.57 | 38.0 | 3.08e-01 | 91.2% | 36.4% |
| 3325793 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.56 | 46.0 | 4.00e-01 | 96.5% | 85.3% |
| 1575638 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.56 | 41.0 | 3.61e-01 | 84.2% | 64.9% |
| 3172637 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.55 | 42.0 | 3.92e-01 | 86.0% | 82.7% |
| 4456620 | 4048.1.1.1 ↗ | alpha bundles › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Second alpha-helical domain in heme-dependent catalases › Catalase-rel | 0.54 | 41.0 | 3.98e-01 | 91.2% | 91.4% |
| 3617983 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 41.0 | 2.54e-01 | 94.7% | 34.6% |
| 5015826 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.52 | 43.0 | 3.00e-01 | 100.0% | 82.3% |