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SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00513
Bact-VirSR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00513
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-165
Domain cluster:
rep: KJ746502.1__AID18371.1__PPF1_58__00058__D3-160
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dp9A01 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.77 | 47.0 | 6.04e-01 | 70.8% | 100.0% |
| 2b78A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.73 | 32.0 | 4.82e-01 | 85.7% | 100.0% |
| 3m6wA03 | 2.30.130.60 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › | 0.68 | 30.0 | 4.43e-01 | 91.3% | 98.5% |
| 4dmgA01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.66 | 30.0 | 4.34e-01 | 95.7% | 95.8% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.64 | 49.0 | 5.27e-01 | 80.1% | 97.8% |
| 1i2dA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.61 | 42.0 | 4.02e-01 | 70.2% | 73.4% |
| 1jhdA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.61 | 42.0 | 3.98e-01 | 70.2% | 72.0% |
| 2gbsA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.61 | 51.0 | 5.33e-01 | 90.7% | 97.2% |
| 2gksB01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.60 | 41.0 | 4.40e-01 | 70.2% | 95.7% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 38.0 | 4.38e-01 | 86.3% | 89.7% |
| 1xneA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.58 | 39.0 | 4.57e-01 | 91.3% | 97.3% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.51 | 30.0 | 3.76e-01 | 87.6% | 98.9% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030320 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.83 | 63.0 | 7.10e-01 | 85.7% | 100.0% |
| 3934702 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 64.0 | 6.82e-01 | 88.2% | 96.4% |
| 5014837 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.77 | 66.0 | 6.46e-01 | 90.1% | 99.4% |
| 3220176 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 64.0 | 6.62e-01 | 87.0% | 95.3% |
| 3619452 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 63.0 | 6.46e-01 | 86.3% | 94.8% |
| 3598242 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.75 | 63.0 | 6.65e-01 | 87.0% | 96.6% |
| 5016521 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.75 | 61.0 | 6.64e-01 | 85.7% | 100.0% |
| 178 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.75 | 51.0 | 5.90e-01 | 78.3% | 93.3% |
| 4940231 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.74 | 59.0 | 6.48e-01 | 87.6% | 100.0% |
| 3375062 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.73 | 63.0 | 6.37e-01 | 89.4% | 93.8% |
| 5079450 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.73 | 61.0 | 6.51e-01 | 87.6% | 99.3% |
| 2391027 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.73 | 64.0 | 6.43e-01 | 92.5% | 98.8% |
| 4999514 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.73 | 60.0 | 6.25e-01 | 85.7% | 100.0% |
| 184578 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.73 | 62.0 | 6.36e-01 | 89.4% | 94.2% |
| 4995643 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.72 | 60.0 | 6.30e-01 | 86.3% | 98.6% |
| 2105336 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.71 | 60.0 | 6.26e-01 | 88.2% | 96.0% |
| 3894869 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 60.0 | 6.14e-01 | 89.4% | 98.1% |
| 4928024 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.70 | 54.0 | 5.99e-01 | 91.9% | 100.0% |
| 3958547 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.70 | 30.0 | 4.54e-01 | 90.7% | 96.9% |
| 4229723 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.70 | 52.0 | 5.41e-01 | 78.9% | 82.0% |
| 4970789 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.69 | 57.0 | 6.12e-01 | 88.2% | 100.0% |
| 3208149 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 53.0 | 5.88e-01 | 94.4% | 100.0% |
| 4967745 | 1.1.9.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30793 | 0.68 | 45.0 | 5.31e-01 | 83.9% | 97.3% |
| 4169267 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.68 | 57.0 | 6.02e-01 | 88.2% | 99.3% |
| 5024536 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 55.0 | 5.82e-01 | 84.5% | 98.6% |
| 5032181 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.68 | 54.0 | 5.81e-01 | 83.9% | 100.0% |
| 4180783 | 1.1.9.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF3850 | 0.68 | 38.0 | 5.02e-01 | 96.3% | 100.0% |
| 4498250 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 46.0 | 5.35e-01 | 82.0% | 100.0% |
| 5023730 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.67 | 58.0 | 6.10e-01 | 91.9% | 100.0% |
| 4957730 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.67 | 54.0 | 5.79e-01 | 87.6% | 97.1% |
| 3972039 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.67 | 54.0 | 5.86e-01 | 87.0% | 100.0% |
| 150962 | 1.1.9.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 | 0.66 | 30.0 | 4.34e-01 | 93.8% | 95.8% |
| 5081834 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 52.0 | 5.66e-01 | 82.0% | 100.0% |
| 4950776 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.66 | 50.0 | 5.39e-01 | 78.9% | 97.9% |
| 4013185 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 53.0 | 5.53e-01 | 91.3% | 92.0% |
| 5073325 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.65 | 53.0 | 5.68e-01 | 86.3% | 100.0% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 44.0 | 5.19e-01 | 96.3% | 100.0% |
| 4014658 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.64 | 46.0 | 5.31e-01 | 87.0% | 99.2% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.63 | 44.0 | 5.15e-01 | 70.8% | 100.0% |
| 4346458 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.62 | 43.0 | 4.13e-01 | 70.2% | 83.9% |
| 171 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.61 | 42.0 | 4.15e-01 | 70.2% | 80.3% |
| 4255729 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.61 | 42.0 | 4.18e-01 | 70.2% | 82.4% |
| 4976717 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.59 | 39.0 | 4.20e-01 | 90.1% | 77.8% |
| 4931996 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.58 | 38.0 | 4.17e-01 | 90.1% | 80.5% |
| 4976256 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 39.0 | 4.19e-01 | 90.1% | 80.7% |
| 3387149 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 50.0 | 4.91e-01 | 94.4% | 94.1% |