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SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00053
Bact-VirSR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00053
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-209
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00499__D174-378
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01434.25 best | Peptidase_M41 | 45.9 | 8.30e-12 | 96.5% | 93.2% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ce7B03 | 1.20.58.760 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 | 0.78 | 70.0 | 7.06e-01 | 99.4% | 92.9% |
| 6nyyE01 | 1.20.58.760 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 | 0.78 | 73.0 | 7.28e-01 | 97.0% | 97.1% |
| 4o6kA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 35.0 | 3.81e-01 | 92.3% | 79.4% |
| 2fq4A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 37.0 | 4.02e-01 | 99.4% | 88.3% |
| 1aluA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 35.0 | 3.70e-01 | 78.7% | 74.5% |
| 2yikA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 45.0 | 3.27e-01 | 96.4% | 90.5% |
| 3wiwA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 46.0 | 3.61e-01 | 100.0% | 88.4% |
| 2x9oA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.50 | 39.0 | 3.58e-01 | 81.7% | 72.1% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3904740 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.87 | 77.0 | 7.61e-01 | 98.2% | 87.9% |
| 4506716 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.87 | 78.0 | 7.60e-01 | 99.4% | 86.7% |
| 4366373 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.86 | 77.0 | 7.48e-01 | 98.2% | 84.9% |
| 3839691 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.86 | 68.0 | 7.30e-01 | 98.2% | 94.5% |
| 3259977 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 80.0 | 7.08e-01 | 100.0% | 80.4% |
| 3487933 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.82 | 79.0 | 7.36e-01 | 98.8% | 93.5% |
| 3494803 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 78.0 | 7.39e-01 | 98.2% | 95.4% |
| 4571181 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 78.0 | 7.54e-01 | 97.6% | 96.2% |
| 4443096 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 80.0 | 7.36e-01 | 100.0% | 95.1% |
| 3698911 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 79.0 | 7.58e-01 | 100.0% | 95.8% |
| None | — | 0.82 | 78.0 | 5.51e-01 | 98.2% | 41.8% | |
| 2589766 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 79.0 | 6.91e-01 | 100.0% | 77.0% |
| 3716280 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 79.0 | 7.39e-01 | 100.0% | 91.0% |
| 3274429 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 78.0 | 7.05e-01 | 98.2% | 80.0% |
| 4876717 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 77.0 | 6.87e-01 | 97.0% | 83.3% |
| 3601268 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.82 | 79.0 | 7.55e-01 | 100.0% | 93.2% |
| 4213610 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.82 | 77.0 | 7.55e-01 | 98.2% | 91.7% |
| 3597298 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.81 | 79.0 | 7.24e-01 | 100.0% | 87.0% |
| 4346320 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 78.0 | 7.25e-01 | 98.2% | 92.0% |
| 4506715 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.81 | 78.0 | 5.57e-01 | 98.8% | 44.0% |
| 4513212 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 77.0 | 6.76e-01 | 98.2% | 77.4% |
| 3614593 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 77.0 | 7.15e-01 | 98.2% | 88.3% |
| 3610238 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 79.0 | 7.20e-01 | 100.0% | 86.6% |
| 4442740 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 79.0 | 7.11e-01 | 100.0% | 89.3% |
| 3369385 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 79.0 | 7.18e-01 | 100.0% | 85.2% |
| 3600824 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.81 | 77.0 | 7.21e-01 | 98.2% | 90.5% |
| 3951009 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 78.0 | 6.91e-01 | 100.0% | 81.3% |
| 4218353 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.81 | 77.0 | 7.12e-01 | 98.2% | 90.7% |
| 3330731 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.80 | 78.0 | 6.97e-01 | 100.0% | 87.3% |
| 3315417 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.80 | 78.0 | 7.03e-01 | 100.0% | 88.4% |
| 4654620 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.80 | 77.0 | 5.38e-01 | 100.0% | 42.1% |
| 3807531 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.80 | 76.0 | 6.58e-01 | 98.2% | 85.4% |
| 3342412 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.80 | 77.0 | 6.89e-01 | 99.4% | 88.6% |
| 2872820 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.80 | 76.0 | 6.97e-01 | 98.2% | 82.5% |
| 3320622 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.78 | 73.0 | 6.67e-01 | 98.2% | 80.0% |
| 5067204 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.77 | 74.0 | 7.10e-01 | 99.4% | 92.6% |
| 4307602 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.77 | 72.0 | 7.18e-01 | 100.0% | 95.9% |
| 4080966 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.76 | 73.0 | 6.66e-01 | 100.0% | 94.8% |
| 1552160 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.76 | 72.0 | 6.76e-01 | 100.0% | 83.9% |
| 5063438 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.72 | 68.0 | 6.64e-01 | 100.0% | 92.2% |
| 4459458 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.71 | 67.0 | 6.40e-01 | 99.4% | 90.2% |
| 1247866 | 191.1.1.44 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_43 | 0.59 | 32.0 | 3.99e-01 | 74.6% | 84.6% |
| 3256665 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 37.0 | 4.06e-01 | 72.2% | 82.1% |
| 3722749 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 39.0 | 3.60e-01 | 73.4% | 90.7% |
| 3218428 | 109.4.1.1401 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_RPAP1 | 0.54 | 38.0 | 3.09e-01 | 71.6% | 52.4% |
| 3934092 | 5081.1.1.0 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like | 0.53 | 34.0 | 3.37e-01 | 84.6% | 59.4% |
| 3258777 | 109.2.1.3 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Glyco_hydro_9 | 0.50 | 44.0 | 3.38e-01 | 98.2% | 91.8% |