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SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00106

Bact-Vir

SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00106

Identity

Kingdom:
phage

Quality

85.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-134
PDB
Domain cluster: representative
D2 high residues 270-336
PDB
D3 medium residues 136-169_181-259
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y7xA02 2.30.30.550 Mainly Beta › Roll › SH3 type barrels. › Major Vault Protein repeat 0.77 39.0 5.37e-01 71.7% 100.0%
2pstX00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.68 30.0 4.02e-01 96.5% 77.0%
4c5wA02 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.51 40.0 3.05e-01 86.7% 63.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3595896 3529.1.1.0 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain 0.84 35.0 5.50e-01 70.8% 100.0%
5028380 3529.1.1.0 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain 0.65 32.0 4.40e-01 87.6% 98.2%
3276759 3529.1.1.6 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Band_7 0.59 34.0 4.29e-01 70.8% 92.9%
D4 medium residues 340-425
PDB