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SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00106
Bact-VirSR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00106
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-134
Domain cluster:
representative
D2
high
residues 270-336
Domain cluster:
rep: IMGVR_UViG_3300009720_000543-3300009720-Ga0116159_100652126__D258-306
D3
medium
residues 136-169_181-259
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y7xA02 | 2.30.30.550 | Mainly Beta › Roll › SH3 type barrels. › Major Vault Protein repeat | 0.77 | 39.0 | 5.37e-01 | 71.7% | 100.0% |
| 2pstX00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.68 | 30.0 | 4.02e-01 | 96.5% | 77.0% |
| 4c5wA02 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.51 | 40.0 | 3.05e-01 | 86.7% | 63.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595896 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.84 | 35.0 | 5.50e-01 | 70.8% | 100.0% |
| 5028380 | 3529.1.1.0 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain | 0.65 | 32.0 | 4.40e-01 | 87.6% | 98.2% |
| 3276759 | 3529.1.1.6 ↗ | beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Band_7 | 0.59 | 34.0 | 4.29e-01 | 70.8% | 92.9% |
D4
medium
residues 340-425
Domain cluster:
rep: IMGVR_UViG_3300009720_000543-3300009720-Ga0116159_100652126__D317-400