←Back to structures
SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00148
Bact-VirSR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00148
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-94
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qwwC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 40.0 | 3.47e-01 | 94.6% | 35.5% |
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.68 | 46.0 | 4.82e-01 | 84.8% | 77.1% |
| 1tj7A02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.63 | 48.0 | 3.42e-01 | 80.4% | 84.2% |
| 1yfmA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.61 | 46.0 | 3.33e-01 | 79.3% | 91.1% |
| 6wngA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.57 | 47.0 | 3.39e-01 | 89.1% | 92.3% |
| 2jbrA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 40.0 | 3.22e-01 | 77.2% | 58.9% |
| 3bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 44.0 | 3.80e-01 | 98.9% | 63.3% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938133 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.84 | 72.0 | 7.51e-01 | 91.3% | 100.0% |
| 5070853 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.67 | 43.0 | 4.54e-01 | 78.3% | 71.8% |
| 4959590 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.61 | 45.0 | 4.68e-01 | 85.9% | 84.7% |
| 1507759 | 376.1.1.5 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UBP | 0.59 | 37.0 | 3.26e-01 | 83.7% | 43.3% |
| 3575349 | 602.1.1.1 ↗ | alpha arrays › L-aspartase middle domain-like › L-aspartase middle domain-like › L-aspartase middle domain-like › Lyase_1 | 0.58 | 46.0 | 3.28e-01 | 85.9% | 85.5% |
| 4975992 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.57 | 40.0 | 4.02e-01 | 75.0% | 90.5% |
| 3174403 | 378.1.1.14 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › AI2M-like_HNH | 0.55 | 36.0 | 4.32e-01 | 71.7% | 96.9% |
| 5017988 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.54 | 40.0 | 3.10e-01 | 76.1% | 54.2% |
| 3748350 | 4305.1.1.1 ↗ | a+b two layers › GTF2I-like repeat › GTF2I-like repeat › GTF2I-like repeat › GTF2I | 0.53 | 41.0 | 4.02e-01 | 87.0% | 91.3% |
| 3957396 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.52 | 37.0 | 3.42e-01 | 76.1% | 64.8% |