←Back to structures
SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00151
Bact-VirSR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00151
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-49
D2
high
residues 59-201
Domain cluster:
rep: IMGVR_UViG_3300023276_001218-3300023276-Ga0233410_1000122310__D48-175
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5bmnA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.76 | 45.0 | 5.73e-01 | 86.7% | 100.0% |
| 1dt4A00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.72 | 38.0 | 5.18e-01 | 87.4% | 100.0% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.70 | 44.0 | 5.39e-01 | 84.6% | 100.0% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.70 | 49.0 | 5.34e-01 | 97.2% | 87.9% |
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.69 | 50.0 | 5.08e-01 | 100.0% | 75.2% |
| 4hjhA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.69 | 47.0 | 5.51e-01 | 91.6% | 99.0% |
| 2f7lA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.68 | 41.0 | 5.03e-01 | 87.4% | 100.0% |
| 1khmA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.67 | 38.0 | 4.78e-01 | 95.1% | 91.0% |
| 4paaA03 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.65 | 40.0 | 3.63e-01 | 90.2% | 45.0% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 34.0 | 4.37e-01 | 88.1% | 90.0% |
| 2z0fA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.64 | 44.0 | 5.13e-01 | 90.9% | 100.0% |
| 1vloA01 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.62 | 36.0 | 3.63e-01 | 87.4% | 55.7% |
| 3qpiA00 | 3.30.70.3420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 41.0 | 3.81e-01 | 97.9% | 55.5% |
| 3c4aA02 | 3.30.9.20 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.61 | 35.0 | 3.45e-01 | 88.1% | 54.1% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.59 | 37.0 | 3.70e-01 | 79.0% | 61.1% |
| 3q63F00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 48.0 | 4.91e-01 | 90.2% | 95.7% |
| 3pu2B00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 47.0 | 4.67e-01 | 89.5% | 90.2% |
| 2ldkA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 47.0 | 4.48e-01 | 90.9% | 87.2% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 46.0 | 4.82e-01 | 87.4% | 97.6% |
| 1d8hA00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.55 | 47.0 | 3.74e-01 | 91.6% | 77.8% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 45.0 | 4.46e-01 | 88.8% | 94.7% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.53 | 35.0 | 3.61e-01 | 79.7% | 69.1% |
| 2l9pA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 43.0 | 4.16e-01 | 89.5% | 87.8% |
| 2lf2A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 44.0 | 4.10e-01 | 90.2% | 85.1% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.52 | 43.0 | 3.79e-01 | 90.9% | 71.4% |
| 2m47A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 44.0 | 4.20e-01 | 91.6% | 92.6% |
| 2l5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 39.0 | 3.63e-01 | 79.0% | 87.4% |
| 3ebkB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 38.0 | 3.64e-01 | 76.9% | 93.3% |
| 4fx9A03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.50 | 30.0 | 3.42e-01 | 88.8% | 77.0% |
| 7cu8E01 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.50 | 38.0 | 3.47e-01 | 77.6% | 82.4% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3542090 | 331.9.1.7 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP5B1_C | 0.73 | 48.0 | 5.43e-01 | 97.9% | 87.3% |
| 5073630 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.71 | 43.0 | 5.32e-01 | 91.6% | 100.0% |
| 3626480 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.70 | 44.0 | 3.36e-01 | 93.0% | 29.0% |
| 3823427 | 331.4.1.2 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF | 0.70 | 44.0 | 4.66e-01 | 88.1% | 71.2% |
| 3262446 | 331.4.1.1 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1 | 0.70 | 43.0 | 5.20e-01 | 86.0% | 94.6% |
| 5078972 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.70 | 40.0 | 5.05e-01 | 85.3% | 95.3% |
| 4996248 | 331.19.1.0 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains | 0.69 | 41.0 | 4.99e-01 | 83.9% | 91.1% |
| 3513651 | 331.9.1.8 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 | 0.69 | 47.0 | 5.31e-01 | 97.9% | 90.0% |
| 3808257 | 331.4.1.33 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CCB1 | 0.68 | 41.0 | 5.10e-01 | 85.3% | 98.8% |
| 4999715 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.68 | 53.0 | 5.67e-01 | 97.2% | 92.8% |
| 3169357 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.68 | 49.0 | 5.53e-01 | 90.9% | 96.4% |
| 3392728 | 331.9.1.8 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 | 0.68 | 48.0 | 5.14e-01 | 98.6% | 83.2% |
| 3702063 | 331.9.1.5 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP4E_app_platf | 0.68 | 45.0 | 5.07e-01 | 98.6% | 88.1% |
| 3846916 | 331.9.1.8 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › AP3B1_C_2 | 0.68 | 48.0 | 5.28e-01 | 100.0% | 90.4% |
| 4073600 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.64 | 46.0 | 5.19e-01 | 95.1% | 97.2% |
| 4635782 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.64 | 45.0 | 5.23e-01 | 91.6% | 100.0% |
| 3869277 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.63 | 47.0 | 4.32e-01 | 100.0% | 60.0% |
| 3742497 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.63 | 45.0 | 4.94e-01 | 96.5% | 92.2% |
| 3493300 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.62 | 50.0 | 5.21e-01 | 97.9% | 90.4% |
| 3296454 | 331.1.1.20 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › AAA_assoc | 0.62 | 46.0 | 5.07e-01 | 88.8% | 96.5% |
| 3495285 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.61 | 42.0 | 4.16e-01 | 89.5% | 66.0% |
| 3953302 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.61 | 43.0 | 4.96e-01 | 86.0% | 100.0% |
| 3496493 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.60 | 51.0 | 4.71e-01 | 100.0% | 72.2% |
| 3630050 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.59 | 50.0 | 4.85e-01 | 93.0% | 83.2% |
| 3849773 | 304.107.1.0 ↗ | a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain | 0.58 | 41.0 | 3.39e-01 | 98.6% | 40.8% |
| 3257870 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.58 | 49.0 | 4.96e-01 | 100.0% | 90.9% |
| 5055280 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.56 | 47.0 | 4.76e-01 | 91.6% | 88.3% |
| 3822070 | 331.10.2.8 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › SAM_decarbox | 0.56 | 41.0 | 4.49e-01 | 91.6% | 94.8% |
| 2841931 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.55 | 46.0 | 4.66e-01 | 90.2% | 92.4% |
| 3288058 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.55 | 46.0 | 4.63e-01 | 90.2% | 94.5% |
| 3591731 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.55 | 50.0 | 4.76e-01 | 99.3% | 87.3% |
| 3663339 | 331.4.1.7 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DUF1499 | 0.54 | 49.0 | 4.84e-01 | 98.6% | 93.5% |
| 3202136 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.52 | 47.0 | 4.18e-01 | 100.0% | 79.0% |
| 5029047 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 39.0 | 3.84e-01 | 78.3% | 78.7% |
| 222627 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.51 | 44.0 | 4.28e-01 | 91.6% | 97.4% |
| 4953666 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.50 | 38.0 | 3.82e-01 | 78.3% | 80.0% |
D3
high
residues 208-388
Domain cluster:
rep: MG752970.1__AVH85374.1__RsoM2USA_446__00446__D13-175
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00004.36 best | AAA | 76.3 | 4.20e-21 | 69.1% | 97.0% |
D4
high
residues 394-484
Domain cluster:
rep: IMGVR_UViG_3300010350_000704-3300010350-Ga0116244_1000871117__D15-101
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3whkA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.91 | 68.0 | 7.61e-01 | 90.1% | 97.2% |
| 5ubvA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.91 | 68.0 | 7.72e-01 | 91.2% | 100.0% |
| 4a3vB01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.89 | 67.0 | 7.51e-01 | 91.2% | 98.6% |
| 2x8aA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.80 | 65.0 | 6.91e-01 | 97.8% | 97.5% |
| 6b5cA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.79 | 65.0 | 6.76e-01 | 86.8% | 97.7% |
| 3d8bB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.79 | 65.0 | 6.88e-01 | 89.0% | 97.6% |
| 4d81A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.78 | 65.0 | 6.50e-01 | 98.9% | 87.2% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 60.0 | 6.29e-01 | 100.0% | 96.4% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 60.0 | 6.24e-01 | 100.0% | 96.4% |
| 2v6zM00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 55.0 | 5.94e-01 | 91.2% | 97.3% |
| 5vc7A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 59.0 | 6.03e-01 | 85.7% | 100.0% |
| 1xwiA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 64.0 | 5.69e-01 | 93.4% | 98.4% |
| 7swlB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 66.0 | 6.35e-01 | 97.8% | 100.0% |
| 6p10B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 63.0 | 6.31e-01 | 97.8% | 95.6% |
| 5ceeA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 57.0 | 4.28e-01 | 98.9% | 99.6% |
| 6rxaA01 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.65 | 41.0 | 4.23e-01 | 76.9% | 66.7% |
| 1ujnA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.65 | 48.0 | 3.87e-01 | 76.9% | 61.3% |
| 4akgA06 | 1.10.8.710 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain | 0.65 | 56.0 | 5.36e-01 | 97.8% | 81.3% |
| 5vjhB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 54.0 | 5.41e-01 | 92.3% | 91.3% |
| 2debB02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.64 | 46.0 | 3.24e-01 | 75.8% | 71.0% |
| 1e94E03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 54.0 | 5.22e-01 | 96.7% | 98.1% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 44.0 | 4.70e-01 | 94.5% | 81.0% |
| 4hl4A02 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.61 | 51.0 | 4.56e-01 | 94.5% | 96.3% |
| 5k29A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.59 | 41.0 | 4.10e-01 | 75.8% | 68.0% |
| 3qwlA03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.58 | 52.0 | 4.58e-01 | 100.0% | 98.5% |
| 2qq8A03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.58 | 49.0 | 4.21e-01 | 92.3% | 69.4% |
| 3sngA00 | 1.10.575.10 | Mainly Alpha › Orthogonal Bundle › P1 Nuclease › P1 Nuclease | 0.58 | 44.0 | 3.18e-01 | 81.3% | 100.0% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 42.0 | 4.33e-01 | 75.8% | 93.1% |
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.56 | 43.0 | 3.67e-01 | 83.5% | 93.6% |
| 3hzjA03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.56 | 48.0 | 4.17e-01 | 100.0% | 71.8% |
| 3q1xA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.55 | 41.0 | 3.63e-01 | 80.2% | 87.1% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 41.0 | 2.90e-01 | 80.2% | 51.0% |
| 4qicC01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.53 | 39.0 | 3.60e-01 | 80.2% | 62.4% |
| 1huxA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 36.0 | 3.15e-01 | 71.4% | 57.1% |
| 1ysyA00 | 1.10.8.370 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › nsp7 replicase | 0.52 | 37.0 | 3.83e-01 | 86.8% | 81.2% |
| 7m2wE01 | 1.20.120.1900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain | 0.52 | 44.0 | 3.10e-01 | 96.7% | 92.9% |
| 3u52D00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.52 | 43.0 | 3.06e-01 | 96.7% | 62.2% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4100763 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.91 | 72.0 | 7.64e-01 | 94.5% | 93.8% |
| 3630661 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 68.0 | 7.30e-01 | 100.0% | 95.0% |
| 3926386 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.85 | 66.0 | 6.84e-01 | 92.3% | 87.1% |
| 3305472 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 67.0 | 6.66e-01 | 95.6% | 81.1% |
| 1167753 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.83 | 68.0 | 6.67e-01 | 97.8% | 81.4% |
| 3385104 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 64.0 | 6.87e-01 | 96.7% | 93.8% |
| 3256466 | 2004.1.1.420 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 | 0.82 | 65.0 | 4.56e-01 | 87.9% | 29.2% |
| 4180021 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 73.0 | 7.06e-01 | 95.6% | 97.0% |
| 3914186 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 71.0 | 7.17e-01 | 97.8% | 94.4% |
| 4014858 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 75.0 | 6.98e-01 | 100.0% | 88.2% |
| 3926810 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 62.0 | 6.78e-01 | 94.5% | 98.7% |
| 3336619 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.80 | 67.0 | 6.94e-01 | 97.8% | 95.3% |
| 4027192 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.79 | 74.0 | 7.14e-01 | 100.0% | 91.0% |
| 3402127 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.79 | 70.0 | 7.06e-01 | 98.9% | 95.6% |
| 3931002 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.79 | 73.0 | 6.97e-01 | 100.0% | 91.4% |
| 4929619 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.79 | 70.0 | 6.97e-01 | 95.6% | 94.7% |
| 4101262 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 68.0 | 6.89e-01 | 98.9% | 94.4% |
| 3261835 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.78 | 67.0 | 6.26e-01 | 97.8% | 75.5% |
| 3343850 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 70.0 | 7.06e-01 | 97.8% | 96.7% |
| 3953286 | 148.1.3.23 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_6 | 0.78 | 72.0 | 6.68e-01 | 98.9% | 97.3% |
| 4967913 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 58.0 | 5.97e-01 | 98.9% | 83.5% |
| 3626717 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 71.0 | 7.07e-01 | 100.0% | 94.7% |
| 4003864 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.78 | 71.0 | 6.65e-01 | 100.0% | 81.8% |
| 3541514 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 70.0 | 7.09e-01 | 100.0% | 98.9% |
| 3514545 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 63.0 | 6.69e-01 | 96.7% | 98.8% |
| 3425375 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 70.0 | 6.49e-01 | 96.7% | 97.3% |
| 3511643 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.77 | 66.0 | 6.87e-01 | 94.5% | 98.8% |
| 4024841 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 69.0 | 6.86e-01 | 96.7% | 95.8% |
| 3857891 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.76 | 67.0 | 6.80e-01 | 97.8% | 95.6% |
| 3254374 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.76 | 69.0 | 6.45e-01 | 97.8% | 99.1% |
| 1233085 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.76 | 67.0 | 6.37e-01 | 98.9% | 81.3% |
| 3826289 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 69.0 | 6.40e-01 | 100.0% | 80.0% |
| 3188113 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.75 | 66.0 | 5.96e-01 | 93.4% | 97.5% |
| 3332069 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 68.0 | 6.24e-01 | 96.7% | 96.5% |
| 3929822 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.75 | 68.0 | 6.58e-01 | 97.8% | 88.0% |
| 3906512 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 66.0 | 6.73e-01 | 97.8% | 96.7% |
| 4313432 | 148.1.3.203 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF28760 | 0.75 | 69.0 | 5.93e-01 | 100.0% | 85.7% |
| 3188710 | 148.1.3.212 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13 | 0.75 | 68.0 | 6.47e-01 | 100.0% | 95.2% |
| 3773199 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.74 | 67.0 | 6.53e-01 | 97.8% | 90.0% |
| 3311758 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.74 | 68.0 | 6.89e-01 | 98.9% | 100.0% |
| 3711661 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.74 | 67.0 | 6.18e-01 | 97.8% | 96.5% |
| 3454679 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.74 | 55.0 | 6.18e-01 | 80.2% | 100.0% |
| 3648481 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.74 | 69.0 | 6.40e-01 | 100.0% | 93.6% |
| 3596559 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.74 | 66.0 | 6.44e-01 | 97.8% | 99.0% |
| 3609318 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.74 | 68.0 | 6.44e-01 | 100.0% | 93.3% |
| 3263242 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.73 | 66.0 | 6.57e-01 | 97.8% | 97.9% |
| 3594407 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 62.0 | 6.42e-01 | 93.4% | 98.8% |
| 3594751 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 66.0 | 5.89e-01 | 96.7% | 98.4% |
| 3519282 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 67.0 | 6.33e-01 | 97.8% | 96.2% |
| 3830570 | 148.1.3.54 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C | 0.73 | 66.0 | 6.05e-01 | 96.7% | 100.0% |
| 168577 | 148.1.3.9 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT | 0.73 | 55.0 | 5.94e-01 | 91.2% | 97.3% |
| 3710237 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.73 | 66.0 | 5.44e-01 | 97.8% | 79.1% |
| 3605946 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 57.0 | 6.03e-01 | 96.7% | 96.2% |
| 3613132 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.72 | 66.0 | 5.56e-01 | 98.9% | 94.5% |
| 3520146 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.72 | 66.0 | 6.40e-01 | 98.9% | 91.0% |
| 3098681 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 59.0 | 5.84e-01 | 100.0% | 86.2% |
| 4947769 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 64.0 | 5.56e-01 | 98.9% | 95.0% |
| 5052308 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.71 | 64.0 | 6.47e-01 | 97.8% | 97.8% |
| 3389471 | 148.1.3.9 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT | 0.70 | 51.0 | 5.65e-01 | 86.8% | 100.0% |
| 3372700 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 54.0 | 5.80e-01 | 91.2% | 98.7% |
| 3414086 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 64.0 | 6.48e-01 | 100.0% | 98.9% |
| 3676159 | 148.1.3.46 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6-ORC-like_ATPase_lid | 0.69 | 59.0 | 5.84e-01 | 95.6% | 88.4% |
| 4940788 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 55.0 | 5.58e-01 | 86.8% | 98.9% |
| 4022426 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 60.0 | 5.68e-01 | 100.0% | 93.6% |
| 3839294 | 148.1.3.26 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 | 0.65 | 54.0 | 5.55e-01 | 92.3% | 97.6% |
| 3955714 | 5081.1.1.3 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid_2 | 0.62 | 54.0 | 4.02e-01 | 98.9% | 77.9% |
| 4003130 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.61 | 47.0 | 4.04e-01 | 85.7% | 61.3% |
| 3482274 | 142.1.1.5 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › SRI | 0.60 | 53.0 | 4.74e-01 | 100.0% | 87.7% |
| 4631912 | 1075.5.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › MurJ | 0.58 | 47.0 | 3.48e-01 | 92.3% | 72.8% |
| 3596499 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 46.0 | 4.05e-01 | 89.0% | 89.6% |
| 3931554 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 39.0 | 3.29e-01 | 73.6% | 85.3% |
| 3592510 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.54 | 37.0 | 2.89e-01 | 93.4% | 33.3% |
| 3495046 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 40.0 | 3.21e-01 | 80.2% | 49.7% |
| 4316925 | 7510.1.1.1 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh | 0.52 | 46.0 | 3.57e-01 | 100.0% | 97.6% |
| 3833442 | 142.1.1.29 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › zf-RVT | 0.52 | 45.0 | 3.66e-01 | 96.7% | 51.9% |
| 4579281 | 141.1.1.3 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › UbiA | 0.52 | 41.0 | 2.93e-01 | 86.8% | 54.0% |
| 3595132 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.52 | 38.0 | 3.00e-01 | 96.7% | 37.3% |
| 3611875 | 4156.1.1.2 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N,HA2_C | 0.52 | 37.0 | 2.93e-01 | 96.7% | 35.4% |