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SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00289
Bact-VirSR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00289
Identity
- Kingdom:
- phage
Quality
64.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-84
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.57 | 50.0 | 3.35e-01 | 100.0% | 77.0% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 39.0 | 3.19e-01 | 71.2% | 49.5% |
| 7w3rB01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 40.0 | 2.55e-01 | 83.1% | 37.3% |
| 3g3sA01 | 3.40.630.110 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › GNAT acetyltransferase-like | 0.53 | 37.0 | 3.06e-01 | 74.6% | 72.4% |
| 3o27B00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.53 | 35.0 | 3.58e-01 | 88.1% | 71.9% |
| 3lltA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 36.0 | 2.42e-01 | 72.9% | 33.1% |
| 3i3lA02 | 3.30.390.160 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.50 | 38.0 | 2.95e-01 | 79.7% | 38.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3703275 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 47.0 | 3.76e-01 | 72.9% | 86.1% |
| 4032314 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 45.0 | 3.66e-01 | 76.3% | 76.5% |
| 4983372 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.60 | 54.0 | 3.54e-01 | 100.0% | 74.4% |
| 3938203 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 38.0 | 2.41e-01 | 74.6% | 36.1% |
| 3937237 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.53 | 37.0 | 2.67e-01 | 72.9% | 78.8% |
| 3795719 | 810.1.1.2 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › GGACT | 0.53 | 41.0 | 3.19e-01 | 91.5% | 81.3% |
| 3334401 | 101.1.2.566 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C | 0.52 | 46.0 | 3.02e-01 | 100.0% | 41.6% |
| 3670739 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.52 | 43.0 | 3.20e-01 | 93.2% | 61.9% |
| 3738677 | 4186.1.1.1 ↗ | beta barrels › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal protein L21p › Ribosomal_L21p | 0.51 | 35.0 | 2.98e-01 | 76.3% | 84.7% |
| 3675509 | 192.3.1.0 ↗ | alpha bundles › Long alpha-hairpin › Fe,Mn superoxide dismutase (SOD), N-terminal domain › Fe,Mn superoxide dismutase (SOD), N-terminal domain | 0.51 | 37.0 | 2.87e-01 | 81.4% | 69.7% |