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SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00422

Bact-Vir

SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00422

Identity

Kingdom:
phage

Quality

67.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-54
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gg6A00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.62 48.0 3.64e-01 88.9% 81.9%
2wuqB00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.57 43.0 2.86e-01 90.7% 19.8%
2p6wA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.53 36.0 2.56e-01 74.1% 60.2%
4lxjA01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 46.0 2.74e-01 100.0% 17.1%
3gycA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 38.0 2.40e-01 85.2% 16.3%
3anwB00 1.20.58.2050 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.50 41.0 3.06e-01 98.1% 46.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3607907 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.65 56.0 3.62e-01 100.0% 65.0%
3183586 304.25.1.2 ↗ a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › AtuA 0.55 46.0 3.65e-01 98.1% 75.0%
D2 medium residues 55-199
PDB