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SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00429
Bact-VirSR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00429
Identity
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-138
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02661.24 best | Fic | 33.0 | 1.30e-07 | 90.4% | 38.7% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4u04A02 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.85 | 80.0 | 5.82e-01 | 100.0% | 49.8% |
| 2f6sA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.83 | 77.0 | 6.09e-01 | 100.0% | 82.2% |
| 5jffA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.81 | 75.0 | 5.88e-01 | 100.0% | 59.6% |
| 2vy3A01 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.81 | 74.0 | 5.46e-01 | 100.0% | 55.8% |
| 3shgA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.80 | 74.0 | 5.71e-01 | 100.0% | 56.6% |
| 7xuxB01 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.80 | 75.0 | 5.41e-01 | 100.0% | 46.7% |
| 4x2cA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.73 | 63.0 | 4.75e-01 | 100.0% | 41.5% |
| 3dd7C00 | 1.20.120.1870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Fic/DOC protein, Fido domain | 0.64 | 59.0 | 5.38e-01 | 100.0% | 77.9% |
| 3lmoA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.60 | 34.0 | 3.48e-01 | 92.6% | 56.4% |
| 4eekA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 35.0 | 4.07e-01 | 89.4% | 84.8% |
| 7jpxA02 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.54 | 43.0 | 4.02e-01 | 93.6% | 68.6% |
| 2mq8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.52 | 36.0 | 3.46e-01 | 92.6% | 61.6% |
| 2chrA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 44.0 | 4.07e-01 | 98.9% | 97.6% |
| 4i16A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.51 | 35.0 | 3.61e-01 | 98.9% | 74.4% |
| 3t57A02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.50 | 36.0 | 3.87e-01 | 87.2% | 94.7% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057213 | 4040.1.1.7 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic_N | 0.87 | 82.0 | 5.59e-01 | 100.0% | 42.7% |
| 4968720 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.87 | 82.0 | 5.69e-01 | 100.0% | 45.9% |
| 4951896 | 4040.1.1.7 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic_N | 0.87 | 82.0 | 5.61e-01 | 100.0% | 43.5% |
| 5016571 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.87 | 81.0 | 5.60e-01 | 100.0% | 42.8% |
| 3931514 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.86 | 81.0 | 5.75e-01 | 100.0% | 44.7% |
| 5081210 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.86 | 81.0 | 5.55e-01 | 100.0% | 45.6% |
| 4643006 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.86 | 81.0 | 5.55e-01 | 100.0% | 40.0% |
| 4940660 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.86 | 80.0 | 5.83e-01 | 100.0% | 46.8% |
| 4993696 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 80.0 | 5.79e-01 | 100.0% | 45.8% |
| 5028435 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 80.0 | 5.64e-01 | 100.0% | 45.8% |
| 4962219 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 79.0 | 5.46e-01 | 100.0% | 43.4% |
| 5027781 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.85 | 79.0 | 5.69e-01 | 100.0% | 44.9% |
| 5027622 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.84 | 79.0 | 5.66e-01 | 100.0% | 45.7% |
| 1769598 | 4040.1.1.2 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic,Fic_N | 0.84 | 78.0 | 5.42e-01 | 100.0% | 42.4% |
| 5032503 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.83 | 78.0 | 5.57e-01 | 100.0% | 46.0% |
| 5058643 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.83 | 77.0 | 5.61e-01 | 100.0% | 47.7% |
| 57620 | 4040.1.1.0 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like | 0.82 | 76.0 | 6.10e-01 | 100.0% | 84.1% |
| 4271275 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.82 | 76.0 | 6.05e-01 | 100.0% | 63.9% |
| 4033963 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.82 | 77.0 | 5.29e-01 | 100.0% | 41.7% |
| 1720316 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.82 | 77.0 | 5.64e-01 | 100.0% | 48.9% |
| 4980541 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.82 | 76.0 | 5.40e-01 | 100.0% | 43.8% |
| 3509340 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.81 | 77.0 | 5.38e-01 | 100.0% | 41.1% |
| 1790166 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.78 | 73.0 | 5.39e-01 | 100.0% | 52.7% |
| 3973701 | 4040.1.1.0 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like | 0.76 | 70.0 | 5.32e-01 | 100.0% | 77.6% |
| 3962121 | 4040.1.1.0 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like | 0.75 | 71.0 | 6.79e-01 | 100.0% | 99.0% |
| 4937383 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.65 | 58.0 | 5.29e-01 | 97.9% | 79.2% |
| 4962046 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.65 | 60.0 | 5.39e-01 | 100.0% | 77.6% |
| 3238600 | 633.2.1.0 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein | 0.57 | 44.0 | 4.56e-01 | 100.0% | 92.9% |
| 4975992 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.55 | 40.0 | 4.04e-01 | 77.7% | 94.7% |
| 4941280 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.55 | 36.0 | 3.15e-01 | 77.7% | 45.0% |
| 4940179 | 2.21.1.3 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 | 0.54 | 36.0 | 2.99e-01 | 76.6% | 40.0% |
| 3490139 | 304.9.1.81 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RBD_AKAP-17A | 0.51 | 36.0 | 3.36e-01 | 97.9% | 58.3% |
| 3711270 | 108.1.1.11 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › Cullin_binding | 0.50 | 35.0 | 3.25e-01 | 92.6% | 55.8% |