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SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00468
Bact-VirSR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00468
Identity
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-92
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6n9aB02 | 3.30.420.200 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.68 | 40.0 | 4.47e-01 | 100.0% | 75.4% |
| 1okjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 40.0 | 4.00e-01 | 100.0% | 57.9% |
| 2mmpA00 | 3.30.160.830 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 30.0 | 3.27e-01 | 100.0% | 59.7% |
| 4pc3C03 | 3.30.479.20 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain | 0.53 | 41.0 | 4.46e-01 | 81.1% | 98.6% |
| 1tfeA01 | 3.30.479.20 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain | 0.53 | 39.0 | 3.88e-01 | 80.0% | 93.8% |
| 7vhqU01 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.51 | 39.0 | 3.70e-01 | 82.2% | 93.6% |
| 1ko2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 41.0 | 3.11e-01 | 88.9% | 83.9% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4137471 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 41.0 | 3.88e-01 | 100.0% | 50.0% |
| 4185827 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 41.0 | 3.88e-01 | 100.0% | 50.0% |
| 3273863 | 220.1.1.44 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N | 0.65 | 38.0 | 3.72e-01 | 100.0% | 53.0% |
| 3795581 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 40.0 | 2.47e-01 | 83.3% | 26.4% |