←Back to structures
SR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00556
Bact-VirSR-VP_0-2_scaffold_141_316084_prodigal-single.1__X__X__00556
Identity
- Kingdom:
- phage
Quality
91.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-103
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 42.0 | 4.82e-01 | 92.9% | 76.1% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 41.0 | 4.71e-01 | 92.9% | 75.0% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 41.0 | 5.18e-01 | 94.9% | 96.6% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 44.0 | 4.86e-01 | 94.9% | 77.5% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 42.0 | 5.12e-01 | 98.0% | 96.8% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 35.0 | 4.30e-01 | 80.8% | 82.0% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 38.0 | 4.50e-01 | 97.0% | 98.4% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.60 | 42.0 | 4.70e-01 | 93.9% | 92.4% |
| 4bb7B00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.59 | 47.0 | 3.55e-01 | 100.0% | 36.3% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.58 | 44.0 | 3.87e-01 | 93.9% | 54.1% |
| 7cceA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.58 | 48.0 | 4.16e-01 | 97.0% | 57.6% |
| 3en2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 37.0 | 3.89e-01 | 73.7% | 70.3% |
| 3agjF01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.58 | 48.0 | 4.47e-01 | 100.0% | 71.7% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 36.0 | 3.63e-01 | 72.7% | 62.6% |
| 2z84A00 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 45.0 | 3.57e-01 | 100.0% | 41.0% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 37.0 | 3.62e-01 | 72.7% | 60.9% |
| 5egwA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 48.0 | 3.28e-01 | 99.0% | 26.4% |
| 2hcjB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 36.0 | 3.73e-01 | 100.0% | 70.2% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 44.0 | 3.64e-01 | 98.0% | 49.1% |
| 1uuzB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.55 | 41.0 | 3.82e-01 | 83.8% | 61.7% |
| 3u4vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 37.0 | 3.58e-01 | 70.7% | 82.8% |
| 4ft4B01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.55 | 50.0 | 4.34e-01 | 100.0% | 82.7% |
| 3pw3D00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 47.0 | 3.29e-01 | 100.0% | 34.0% |
| 3k8aB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 36.0 | 3.59e-01 | 74.7% | 66.0% |
| 6vilA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 47.0 | 4.16e-01 | 99.0% | 73.1% |
| 5w17A01 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.52 | 42.0 | 3.76e-01 | 91.9% | 88.7% |
| 3exzB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 42.0 | 3.66e-01 | 88.9% | 95.9% |
| 2ec1A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 37.0 | 3.59e-01 | 80.8% | 93.2% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3256432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 45.0 | 5.64e-01 | 93.9% | 95.0% |
| 4982354 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.77 | 47.0 | 5.68e-01 | 91.9% | 93.8% |
| 3564972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 44.0 | 5.18e-01 | 98.0% | 82.9% |
| 3660964 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.75 | 42.0 | 4.27e-01 | 93.9% | 55.0% |
| 2557227 | 4.7.1.2 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF | 0.74 | 46.0 | 5.13e-01 | 96.0% | 80.5% |
| 4501723 | 4.8.1.45 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 | 0.73 | 41.0 | 5.28e-01 | 96.0% | 100.0% |
| 4152374 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 54.0 | 5.83e-01 | 98.0% | 91.7% |
| 4387111 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.71 | 54.0 | 5.96e-01 | 99.0% | 97.5% |
| 3907176 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.65 | 51.0 | 5.28e-01 | 99.0% | 91.1% |
| 4029199 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 49.0 | 2.82e-01 | 99.0% | 9.3% |
| 5017073 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.65 | 43.0 | 3.75e-01 | 100.0% | 44.7% |
| 4027502 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 40.0 | 4.72e-01 | 96.0% | 95.4% |
| 3471772 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.61 | 47.0 | 4.92e-01 | 94.9% | 90.0% |
| 3607981 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 4.59e-01 | 98.0% | 94.6% |
| 3923766 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 53.0 | 5.04e-01 | 100.0% | 81.7% |
| 3824811 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.59 | 48.0 | 4.06e-01 | 96.0% | 54.8% |
| 3244679 | 219.1.1.1 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1 | 0.58 | 52.0 | 3.53e-01 | 100.0% | 26.7% |
| 3242335 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.58 | 46.0 | 3.68e-01 | 100.0% | 43.1% |
| 3173893 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.58 | 47.0 | 3.47e-01 | 100.0% | 34.7% |
| 3992087 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.58 | 47.0 | 3.91e-01 | 96.0% | 50.6% |
| 3613205 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 50.0 | 3.74e-01 | 100.0% | 37.6% |
| 3575867 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.57 | 47.0 | 4.15e-01 | 100.0% | 62.3% |
| 4023161 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 51.0 | 4.23e-01 | 100.0% | 59.4% |
| 3454181 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.57 | 48.0 | 3.91e-01 | 96.0% | 49.4% |
| 4001653 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.57 | 46.0 | 3.74e-01 | 100.0% | 47.2% |
| 3521904 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 44.0 | 4.50e-01 | 100.0% | 85.3% |
| 3233524 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.57 | 46.0 | 3.80e-01 | 97.0% | 49.1% |
| 3686225 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 45.0 | 3.64e-01 | 98.0% | 45.4% |
| 3490245 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 43.0 | 4.49e-01 | 100.0% | 88.9% |
| 3592332 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 41.0 | 4.09e-01 | 94.9% | 72.4% |
| 3836457 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.56 | 45.0 | 3.90e-01 | 99.0% | 56.0% |
| 3374893 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.56 | 47.0 | 4.10e-01 | 100.0% | 61.4% |
| 3549321 | 4.11.1.5 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24, PF31032 | 0.56 | 39.0 | 3.41e-01 | 99.0% | 45.6% |
| 3621303 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 43.0 | 3.95e-01 | 100.0% | 63.1% |
| 3995290 | 4.1.1.332 ↗ | beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 | 0.55 | 49.0 | 4.77e-01 | 100.0% | 93.6% |
| 3670066 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.55 | 43.0 | 3.74e-01 | 99.0% | 53.5% |
| 3505947 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.55 | 48.0 | 4.60e-01 | 100.0% | 93.3% |
| 2672307 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.55 | 50.0 | 4.25e-01 | 99.0% | 69.2% |
| 3631731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 46.0 | 4.07e-01 | 100.0% | 62.0% |
| 3931053 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.55 | 49.0 | 4.90e-01 | 98.0% | 97.0% |
| 4025316 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 46.0 | 3.72e-01 | 100.0% | 46.8% |
| 3415831 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.54 | 48.0 | 4.55e-01 | 100.0% | 92.5% |
| 3229482 | 71.1.1.19 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 | 0.54 | 42.0 | 3.35e-01 | 82.8% | 79.0% |
| 3629455 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.54 | 50.0 | 3.97e-01 | 100.0% | 69.5% |
| 3460287 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.54 | 50.0 | 4.17e-01 | 99.0% | 68.8% |
| 4003702 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.54 | 49.0 | 3.92e-01 | 100.0% | 51.8% |
| 3638086 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 47.0 | 3.85e-01 | 100.0% | 52.8% |
| 3501834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 40.0 | 4.31e-01 | 98.0% | 92.9% |
| 3999482 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.54 | 48.0 | 4.64e-01 | 100.0% | 95.5% |
| 3023952 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 48.0 | 4.64e-01 | 99.0% | 94.7% |
| 3208838 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.53 | 46.0 | 4.02e-01 | 100.0% | 61.9% |
| 3330137 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.53 | 48.0 | 4.10e-01 | 100.0% | 65.6% |
| 3683487 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.53 | 42.0 | 3.52e-01 | 100.0% | 49.1% |
| 3411858 | 4.1.1.456 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH, BAHCC1-like_Tudor, SH3_TNRC18 | 0.53 | 48.0 | 3.15e-01 | 100.0% | 27.6% |
| 3823515 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.53 | 49.0 | 4.15e-01 | 100.0% | 72.3% |
| 3410266 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.53 | 45.0 | 3.99e-01 | 93.9% | 64.8% |
| 4094583 | 101.33.1.3 ↗ | alpha arrays › HTH › Replication foci-targeting sequence C-terminal domain › Replication foci-targeting sequence C-terminal domain › BAH | 0.52 | 48.0 | 3.30e-01 | 100.0% | 32.3% |
| 3334435 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 48.0 | 4.07e-01 | 99.0% | 72.9% |
| 3889197 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 47.0 | 3.95e-01 | 100.0% | 71.2% |
| 3510024 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 44.0 | 4.29e-01 | 94.9% | 82.7% |
| 3444064 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.52 | 47.0 | 3.77e-01 | 100.0% | 52.8% |
| 2141638 | 9.5.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein TT1927B › Hypothetical protein TT1927B › YceI | 0.52 | 42.0 | 3.62e-01 | 91.9% | 78.2% |
| 3313137 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.51 | 47.0 | 3.98e-01 | 100.0% | 64.4% |
| 3606733 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 39.0 | 3.25e-01 | 80.8% | 55.8% |
| 3395766 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.50 | 45.0 | 3.72e-01 | 100.0% | 60.0% |
| 3612182 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 42.0 | 4.45e-01 | 91.9% | 100.0% |