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SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00119
Bact-VirSR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00119
Identity
- Kingdom:
- phage
Quality
80.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-104
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6bhdA03 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 47.0 | 5.42e-01 | 100.0% | 79.4% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.72 | 40.0 | 3.97e-01 | 100.0% | 51.1% |
| 1vwxM01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 43.0 | 4.37e-01 | 100.0% | 60.0% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 36.0 | 3.98e-01 | 98.8% | 61.8% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 39.0 | 4.85e-01 | 100.0% | 97.9% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 45.0 | 4.93e-01 | 98.8% | 85.7% |
| 2l1tA00 | 2.30.110.70 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.58 | 45.0 | 4.12e-01 | 82.4% | 80.7% |
| 2fdbN00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.57 | 50.0 | 4.22e-01 | 98.8% | 87.2% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 46.0 | 3.96e-01 | 100.0% | 64.5% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 39.0 | 3.69e-01 | 95.3% | 60.6% |
| 1sr4A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 46.0 | 3.73e-01 | 96.5% | 83.2% |
| 1uliB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 42.0 | 3.31e-01 | 87.1% | 85.3% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 45.0 | 3.83e-01 | 100.0% | 82.2% |
| 1fgyA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 45.0 | 3.97e-01 | 100.0% | 75.4% |
| 4jdeA01 | 2.60.40.3820 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 38.0 | 3.31e-01 | 82.4% | 93.4% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3561707 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.83 | 48.0 | 4.52e-01 | 100.0% | 49.0% |
| 3389311 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 47.0 | 4.39e-01 | 100.0% | 50.0% |
| 3393297 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.80 | 46.0 | 4.82e-01 | 100.0% | 62.5% |
| 3465976 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 45.0 | 5.08e-01 | 100.0% | 75.4% |
| 3612184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 45.0 | 5.23e-01 | 100.0% | 81.7% |
| 3359784 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.77 | 45.0 | 5.05e-01 | 100.0% | 75.4% |
| 3429682 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 44.0 | 4.74e-01 | 100.0% | 65.3% |
| 3503815 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 44.0 | 4.46e-01 | 100.0% | 57.6% |
| 3340900 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 44.0 | 4.98e-01 | 100.0% | 75.4% |
| 3911241 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.75 | 43.0 | 4.10e-01 | 100.0% | 49.0% |
| 3622055 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.74 | 43.0 | 4.37e-01 | 100.0% | 57.6% |
| 3577505 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 42.0 | 4.25e-01 | 100.0% | 57.6% |
| 3520311 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.69 | 49.0 | 4.39e-01 | 100.0% | 54.8% |
| 5029405 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.64 | 38.0 | 4.52e-01 | 100.0% | 90.9% |
| 3705404 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.63 | 58.0 | 4.06e-01 | 100.0% | 76.5% |
| 3713672 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 48.0 | 4.37e-01 | 100.0% | 61.7% |
| 3349135 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 44.0 | 4.32e-01 | 100.0% | 71.1% |
| 3707345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 53.0 | 5.24e-01 | 100.0% | 96.7% |
| 3812263 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.58 | 53.0 | 4.68e-01 | 98.8% | 75.8% |
| 3631831 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 51.0 | 3.91e-01 | 100.0% | 94.6% |
| 3829476 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 44.0 | 3.51e-01 | 100.0% | 40.0% |
| 3685970 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 51.0 | 4.10e-01 | 100.0% | 96.5% |
| 3182983 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.58 | 43.0 | 2.81e-01 | 81.2% | 42.9% |
| 4086633 | 6.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF | 0.56 | 50.0 | 4.07e-01 | 100.0% | 80.0% |
| 3659149 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 44.0 | 4.08e-01 | 100.0% | 68.6% |
| 3182463 | 220.1.1.154 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_EXO84 | 0.54 | 48.0 | 3.71e-01 | 100.0% | 57.4% |
| 3205589 | 5.1.11.10 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Rrn6_beta-prop | 0.52 | 44.0 | 2.83e-01 | 92.9% | 33.2% |
| 3893809 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.52 | 48.0 | 4.35e-01 | 100.0% | 86.1% |
| 3189800 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.52 | 42.0 | 3.56e-01 | 88.2% | 94.5% |
| 1282324 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.52 | 41.0 | 3.64e-01 | 88.2% | 87.2% |
| 2387800 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.51 | 45.0 | 3.79e-01 | 100.0% | 96.7% |
| 3769735 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.50 | 41.0 | 3.87e-01 | 100.0% | 74.0% |
| 3528458 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.50 | 40.0 | 3.86e-01 | 97.6% | 74.0% |