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SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00161
Bact-VirSR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00161
Identity
- Kingdom:
- phage
Quality
78.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-59
Domain cluster:
representative
CATH (74)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gukA00 | 3.30.2190.10 | Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like | 0.76 | 60.0 | 4.63e-01 | 83.6% | 64.9% |
| 3m05B01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.75 | 67.0 | 5.63e-01 | 100.0% | 65.2% |
| 2fphX01 | 3.30.1370.160 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.75 | 55.0 | 4.92e-01 | 83.6% | 55.8% |
| 2n8lA00 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.72 | 62.0 | 4.30e-01 | 100.0% | 34.6% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.71 | 62.0 | 5.74e-01 | 100.0% | 80.3% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 62.0 | 5.27e-01 | 100.0% | 67.8% |
| 3tm4A01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.70 | 60.0 | 4.20e-01 | 100.0% | 36.0% |
| 3b8mC01 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.70 | 59.0 | 4.42e-01 | 100.0% | 82.8% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 59.0 | 5.66e-01 | 100.0% | 81.8% |
| 3g8qA02 | 3.30.70.1940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 60.0 | 5.34e-01 | 100.0% | 81.2% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 61.0 | 5.33e-01 | 100.0% | 65.9% |
| 3hluA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 60.0 | 5.51e-01 | 100.0% | 78.1% |
| 1q7sA00 | 3.40.1490.10 | Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 | 0.69 | 60.0 | 4.73e-01 | 100.0% | 93.2% |
| 1dt4A00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.69 | 61.0 | 5.53e-01 | 100.0% | 94.5% |
| 3wy7D01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.68 | 58.0 | 4.59e-01 | 100.0% | 55.8% |
| 3aawA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.67 | 57.0 | 4.16e-01 | 100.0% | 37.6% |
| 2dt9A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 57.0 | 5.14e-01 | 100.0% | 79.7% |
| 1a7gE00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.67 | 56.0 | 5.05e-01 | 100.0% | 78.0% |
| 2jzxA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.67 | 56.0 | 5.09e-01 | 100.0% | 79.7% |
| 2anrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.67 | 56.0 | 5.08e-01 | 100.0% | 83.7% |
| 3k59A02 | 3.30.70.2250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif | 0.66 | 56.0 | 5.35e-01 | 100.0% | 83.6% |
| 1kvnA00 | 3.30.56.30 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Signal recognition particle, SRP19-like subunit | 0.66 | 56.0 | 4.64e-01 | 100.0% | 79.8% |
| 1vi7A02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 56.0 | 5.22e-01 | 100.0% | 76.1% |
| 1kwmA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.66 | 57.0 | 4.94e-01 | 100.0% | 65.9% |
| 3lduA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.66 | 52.0 | 3.69e-01 | 100.0% | 27.8% |
| 2jvzA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.65 | 54.0 | 4.92e-01 | 100.0% | 83.7% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 55.0 | 4.82e-01 | 100.0% | 74.2% |
| 1lk5A02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 55.0 | 4.99e-01 | 100.0% | 82.3% |
| 3s1tA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 53.0 | 4.87e-01 | 100.0% | 77.5% |
| 1we8A01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.65 | 54.0 | 4.82e-01 | 100.0% | 78.6% |
| 3gygC02 | 3.30.70.1410 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › yhjk (haloacid dehalogenase-like hydrolase protein) domain | 0.64 | 48.0 | 4.28e-01 | 81.8% | 57.5% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.64 | 55.0 | 5.10e-01 | 98.2% | 91.7% |
| 5fiiB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 53.0 | 4.86e-01 | 100.0% | 82.1% |
| 2ougA00 | 3.30.70.940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › NusG, N-terminal domain | 0.64 | 54.0 | 4.10e-01 | 100.0% | 48.9% |
| 7qh2C03 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 53.0 | 4.86e-01 | 100.0% | 87.2% |
| 2ctlA00 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.63 | 54.0 | 4.56e-01 | 100.0% | 68.0% |
| 3l7oA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 52.0 | 4.87e-01 | 96.4% | 84.7% |
| 1nxiA00 | 3.30.70.970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like | 0.63 | 53.0 | 4.11e-01 | 100.0% | 52.3% |
| 2bwnB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.63 | 53.0 | 3.91e-01 | 100.0% | 39.6% |
| 5c4iE01 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.63 | 53.0 | 3.64e-01 | 100.0% | 82.9% |
| 2f8mA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 52.0 | 4.75e-01 | 100.0% | 87.3% |
| 1m0sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 53.0 | 4.92e-01 | 100.0% | 81.9% |
| 2kilA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.62 | 45.0 | 3.26e-01 | 81.8% | 28.7% |
| 2lu1A00 | 3.30.70.2370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 51.0 | 4.51e-01 | 100.0% | 85.4% |
| 1sq1A00 | 3.60.150.10 | Alpha Beta › 4-Layer Sandwich › Chorismate synthase, AroC fold › Chorismate synthase AroC | 0.62 | 49.0 | 3.26e-01 | 100.0% | 38.3% |
| 3g3sA01 | 3.40.630.110 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › GNAT acetyltransferase-like | 0.61 | 45.0 | 3.58e-01 | 81.8% | 37.9% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 48.0 | 3.76e-01 | 90.9% | 46.1% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.61 | 50.0 | 4.50e-01 | 100.0% | 64.0% |
| 3qv2A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 46.0 | 3.18e-01 | 83.6% | 27.0% |
| 3b8pA00 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.61 | 49.0 | 3.49e-01 | 100.0% | 47.3% |
| 4e4tA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.60 | 51.0 | 3.54e-01 | 100.0% | 35.6% |
| 3ke3A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 49.0 | 4.08e-01 | 100.0% | 61.6% |
| 2jtvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 43.0 | 4.17e-01 | 89.1% | 69.2% |
| 3k5iA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 49.0 | 3.46e-01 | 100.0% | 51.5% |
| 6w5yC01 | 3.90.310.10 | Alpha Beta › Alpha-Beta Complex › Viral Glycoprotein Gp70 › ENV polyprotein, receptor-binding domain | 0.58 | 46.0 | 3.63e-01 | 98.2% | 92.4% |
| 1rjjA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.01e-01 | 100.0% | 64.0% |
| 2go9A02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 46.0 | 4.21e-01 | 100.0% | 73.8% |
| 2cpiA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 47.0 | 4.32e-01 | 100.0% | 88.9% |
| 2z04B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.57 | 47.0 | 3.38e-01 | 100.0% | 32.8% |
| 3c6kA01 | 3.30.160.110 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain | 0.57 | 46.0 | 4.05e-01 | 100.0% | 80.9% |
| 2vugA05 | 3.30.70.3360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 41.0 | 4.24e-01 | 85.5% | 95.8% |
| 2ychA02 | 3.30.1490.300 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.56 | 43.0 | 4.25e-01 | 87.3% | 100.0% |
| 4dkjA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 42.0 | 2.72e-01 | 85.5% | 19.6% |
| 1t90A02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.56 | 46.0 | 3.27e-01 | 100.0% | 55.8% |
| 5kf6B02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.56 | 45.0 | 3.16e-01 | 100.0% | 47.6% |
| 3cueB00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.54 | 42.0 | 3.15e-01 | 90.9% | 43.1% |
| 1av5A00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.54 | 40.0 | 3.33e-01 | 83.6% | 63.7% |
| 6s9vB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 43.0 | 2.75e-01 | 96.4% | 19.5% |
| 1yx0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 38.0 | 2.90e-01 | 78.2% | 48.3% |
| 6vt2A03 | 2.60.40.4140 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 42.0 | 3.46e-01 | 98.2% | 80.0% |
| 3ke2B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.76e-01 | 100.0% | 78.1% |
| 1ka1A02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.52 | 41.0 | 3.12e-01 | 87.3% | 43.0% |
| 3up9A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 43.0 | 3.36e-01 | 100.0% | 80.4% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 40.0 | 3.53e-01 | 96.4% | 71.9% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3332606 | 2003.1.5.154 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29, Methyltransf_11 | 0.78 | 59.0 | 3.30e-01 | 87.3% | 7.6% |
| 1481299 | 304.5.1.4 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CdAMP_rec | 0.76 | 68.0 | 5.34e-01 | 100.0% | 53.1% |
| 5620 | 320.3.1.1 ↗ | a+b two layers › R3H domain-like › PG1857-like › PG1857-like › DUF2023 | 0.76 | 60.0 | 4.63e-01 | 83.6% | 64.9% |
| 5038487 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.76 | 66.0 | 5.64e-01 | 100.0% | 61.1% |
| 1481304 | 304.5.1.4 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CdAMP_rec | 0.74 | 65.0 | 6.43e-01 | 100.0% | 93.1% |
| 4935067 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.74 | 65.0 | 5.67e-01 | 100.0% | 68.2% |
| 3326172 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.74 | 56.0 | 3.81e-01 | 87.3% | 23.1% |
| 5023057 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.74 | 65.0 | 5.83e-01 | 100.0% | 72.0% |
| 4952784 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.73 | 65.0 | 5.54e-01 | 100.0% | 64.4% |
| 5022418 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.73 | 65.0 | 6.17e-01 | 100.0% | 89.2% |
| 4220147 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.73 | 65.0 | 5.62e-01 | 100.0% | 68.2% |
| 3479702 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.73 | 63.0 | 5.18e-01 | 100.0% | 62.9% |
| 5078855 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.73 | 63.0 | 5.75e-01 | 100.0% | 72.0% |
| 4524153 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.73 | 64.0 | 5.55e-01 | 100.0% | 67.1% |
| 3378678 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.73 | 63.0 | 5.54e-01 | 100.0% | 81.2% |
| 4111686 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.72 | 62.0 | 5.03e-01 | 100.0% | 62.7% |
| 4958097 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.72 | 62.0 | 5.34e-01 | 100.0% | 74.4% |
| 4025295 | 2501.1.1.1 ↗ | a/b three-layered sandwiches › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › Peptidyl-tRNA hydrolase II › PTH2 | 0.72 | 62.0 | 4.80e-01 | 100.0% | 94.6% |
| 3828529 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.71 | 61.0 | 5.20e-01 | 100.0% | 70.5% |
| 3820834 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.71 | 62.0 | 5.11e-01 | 100.0% | 69.0% |
| 4963170 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.71 | 61.0 | 5.28e-01 | 100.0% | 62.2% |
| 5013331 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.71 | 61.0 | 5.81e-01 | 100.0% | 96.9% |
| 4946891 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.71 | 61.0 | 5.68e-01 | 100.0% | 77.1% |
| 4135575 | 304.7.1.25 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Se_S_carrier | 0.70 | 63.0 | 5.55e-01 | 100.0% | 70.0% |
| 4044550 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.70 | 61.0 | 5.42e-01 | 100.0% | 72.5% |
| 4025572 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.70 | 61.0 | 5.07e-01 | 100.0% | 69.0% |
| 3344096 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.70 | 61.0 | 5.15e-01 | 100.0% | 72.6% |
| 4972691 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.70 | 61.0 | 5.04e-01 | 100.0% | 56.0% |
| 3480120 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.70 | 60.0 | 5.19e-01 | 100.0% | 75.6% |
| 4934181 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 60.0 | 5.34e-01 | 100.0% | 77.5% |
| 144952 | 304.5.1.10 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CBD_PlyG | 0.69 | 61.0 | 5.33e-01 | 100.0% | 65.9% |
| 4282814 | 304.30.1.1 ↗ | a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A | 0.69 | 60.0 | 5.47e-01 | 100.0% | 85.3% |
| 1265480 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.69 | 60.0 | 5.51e-01 | 100.0% | 78.1% |
| 5024019 | 327.16.1.18 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system › Se_S_carrier | 0.69 | 60.0 | 5.35e-01 | 100.0% | 76.2% |
| 3375878 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.69 | 59.0 | 5.43e-01 | 100.0% | 73.3% |
| 3781954 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.69 | 59.0 | 5.02e-01 | 100.0% | 69.5% |
| 3673542 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.69 | 53.0 | 5.06e-01 | 85.5% | 81.5% |
| 3528822 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.69 | 60.0 | 5.03e-01 | 100.0% | 71.6% |
| 3816355 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.69 | 60.0 | 5.09e-01 | 100.0% | 74.2% |
| 3583968 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.68 | 59.0 | 4.76e-01 | 100.0% | 61.8% |
| 3481560 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.68 | 58.0 | 4.80e-01 | 100.0% | 64.8% |
| 3282053 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.68 | 57.0 | 5.06e-01 | 100.0% | 74.1% |
| 3173838 | 327.11.2.63 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF29522 | 0.68 | 59.0 | 5.36e-01 | 100.0% | 96.0% |
| 4045503 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.67 | 57.0 | 5.26e-01 | 100.0% | 76.0% |
| 4951256 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 56.0 | 4.92e-01 | 100.0% | 68.9% |
| 4958905 | 241.5.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › DNA-binding C-terminal domain of the transcription factor MotA › DNA-binding C-terminal domain of the transcription factor MotA › DUF1529 | 0.67 | 58.0 | 4.59e-01 | 100.0% | 52.1% |
| 4105022 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.67 | 57.0 | 4.96e-01 | 100.0% | 66.7% |
| 4157691 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.67 | 57.0 | 4.71e-01 | 100.0% | 63.8% |
| 3520858 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.67 | 56.0 | 5.00e-01 | 100.0% | 76.5% |
| 3590219 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.67 | 57.0 | 4.94e-01 | 100.0% | 64.4% |
| 3928824 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.67 | 57.0 | 5.02e-01 | 100.0% | 80.0% |
| 3798239 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 56.0 | 4.98e-01 | 100.0% | 78.8% |
| 4345964 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.66 | 57.0 | 4.84e-01 | 100.0% | 60.0% |
| 3505381 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.66 | 56.0 | 4.89e-01 | 100.0% | 73.3% |
| 3603235 | 242.1.1.2 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 | 0.66 | 54.0 | 4.45e-01 | 90.9% | 59.0% |
| 4883556 | 304.17.1.1 ↗ | a+b two layers › Alpha-beta plaits › N-utilization substance G protein NusG, N-terminal domain › N-utilization substance G protein NusG, N-terminal domain › NusG | 0.65 | 55.0 | 4.62e-01 | 100.0% | 72.0% |
| 4963469 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.65 | 51.0 | 4.23e-01 | 90.9% | 54.3% |
| 4373827 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.65 | 56.0 | 4.85e-01 | 100.0% | 64.8% |
| 4928410 | 2003.1.7.10 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › Rib_5-P_isom_A | 0.65 | 55.0 | 3.71e-01 | 100.0% | 28.7% |
| 3649210 | 101.1.9.2 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › SRP19 | 0.65 | 56.0 | 4.65e-01 | 100.0% | 76.0% |
| 4030555 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.65 | 55.0 | 4.97e-01 | 100.0% | 85.0% |
| 4141791 | 304.30.1.1 ↗ | a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A | 0.64 | 54.0 | 4.99e-01 | 100.0% | 86.7% |
| 3587356 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.64 | 55.0 | 4.75e-01 | 100.0% | 63.3% |
| 3487967 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.64 | 55.0 | 4.92e-01 | 100.0% | 85.0% |
| 4638999 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.64 | 55.0 | 4.91e-01 | 100.0% | 71.2% |
| 4931230 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.64 | 54.0 | 4.71e-01 | 100.0% | 65.6% |
| 5918 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.63 | 54.0 | 4.77e-01 | 100.0% | 78.6% |
| 1189981 | 304.30.1.1 ↗ | a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A | 0.63 | 53.0 | 4.63e-01 | 100.0% | 64.1% |
| 5011359 | 101.1.9.2 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › SRP19 | 0.63 | 53.0 | 4.62e-01 | 100.0% | 83.3% |
| 3701239 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.63 | 47.0 | 4.21e-01 | 81.8% | 58.7% |
| 4854243 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.63 | 52.0 | 4.43e-01 | 100.0% | 86.4% |
| 4969434 | 304.30.1.1 ↗ | a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A | 0.63 | 52.0 | 4.66e-01 | 100.0% | 75.3% |
| 4934117 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.62 | 52.0 | 4.56e-01 | 96.4% | 71.8% |
| 4994468 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.62 | 52.0 | 4.54e-01 | 100.0% | 63.3% |
| 3725029 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.60 | 50.0 | 4.08e-01 | 100.0% | 48.7% |
| 5072186 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.60 | 45.0 | 3.86e-01 | 90.9% | 52.4% |
| 4569017 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.59 | 49.0 | 4.39e-01 | 100.0% | 72.9% |
| 3583421 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.59 | 48.0 | 4.18e-01 | 100.0% | 69.5% |
| 4673494 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.58 | 46.0 | 3.10e-01 | 100.0% | 33.6% |
| 3588762 | 7587.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Rossmann-like domain in carbohydrate phosphatases › Inositol_P | 0.57 | 44.0 | 3.57e-01 | 87.3% | 43.6% |
| 5044477 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 39.0 | 3.28e-01 | 74.5% | 73.0% |
| 3383835 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.56 | 43.0 | 3.56e-01 | 92.7% | 55.0% |
| 3465479 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.55 | 41.0 | 2.76e-01 | 87.3% | 31.9% |
| 4354474 | 101.1.2.598 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, POLR3C_WHD | 0.55 | 44.0 | 2.62e-01 | 90.9% | 66.2% |
| 5048466 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 41.0 | 3.21e-01 | 87.3% | 43.6% |
| 5045098 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.54 | 40.0 | 3.55e-01 | 87.3% | 72.2% |
| 3821254 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.53 | 45.0 | 3.55e-01 | 98.2% | 54.4% |
| 5030026 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.53 | 42.0 | 3.73e-01 | 96.4% | 68.9% |
| 4969221 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.52 | 40.0 | 2.61e-01 | 92.7% | 22.6% |
| 3280969 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.52 | 40.0 | 3.45e-01 | 92.7% | 65.0% |
| 4997952 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 39.0 | 3.54e-01 | 89.1% | 80.0% |