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SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00163
Bact-VirSR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00163
Identity
- Kingdom:
- phage
Quality
91.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-108
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ctoA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.60 | 36.0 | 4.35e-01 | 87.4% | 100.0% |
| 1nubA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.53 | 39.0 | 3.56e-01 | 78.6% | 67.4% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3715371 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.62 | 47.0 | 3.58e-01 | 83.5% | 71.3% |
| 3406182 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 43.0 | 4.26e-01 | 77.7% | 86.4% |
| 3654479 | 101.1.2.361 ↗ | alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-binding | 0.58 | 32.0 | 3.45e-01 | 77.7% | 62.4% |
| 3564291 | 101.1.1.66 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_5 | 0.54 | 34.0 | 3.76e-01 | 70.9% | 77.6% |
| 3489722 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.52 | 33.0 | 3.34e-01 | 88.3% | 63.8% |
| 3855578 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 42.0 | 3.21e-01 | 88.3% | 82.5% |
| 5023828 | 159.1.1.1 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG | 0.51 | 30.0 | 3.22e-01 | 79.6% | 65.9% |
| 3706386 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.51 | 38.0 | 3.69e-01 | 86.4% | 68.3% |
| 3936978 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 38.0 | 2.81e-01 | 81.6% | 60.9% |
| 5023625 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.51 | 36.0 | 3.68e-01 | 72.8% | 86.0% |