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SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00188
Bact-VirSR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00188
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-92
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vbnL01 | 3.30.160.190 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › atu1810 like domain | 0.58 | 41.0 | 4.10e-01 | 75.3% | 82.1% |
| 1rypL00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.56 | 42.0 | 3.25e-01 | 80.9% | 44.8% |
| 1btkA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 46.0 | 3.89e-01 | 93.3% | 91.9% |
| 1v5uA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 45.0 | 4.16e-01 | 92.1% | 82.1% |
| 1wi1A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 41.0 | 3.89e-01 | 82.0% | 90.1% |
| 4ktwA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.55 | 37.0 | 3.08e-01 | 70.8% | 42.5% |
| 5g5tA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 37.0 | 2.90e-01 | 73.0% | 31.4% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 38.0 | 3.35e-01 | 75.3% | 96.4% |
| 3fm8D03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 40.0 | 3.78e-01 | 80.9% | 84.3% |
| 2gs3A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 41.0 | 3.39e-01 | 87.6% | 98.8% |
| 2kumA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 33.0 | 3.88e-01 | 75.3% | 100.0% |
| 5kolD00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.51 | 41.0 | 3.45e-01 | 93.3% | 77.9% |
| 5zx8A00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.51 | 36.0 | 2.95e-01 | 76.4% | 44.6% |
| 1qqgA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 37.0 | 3.61e-01 | 79.8% | 89.3% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3902875 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 37.0 | 4.20e-01 | 75.3% | 83.1% |
| 3774381 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 34.0 | 3.78e-01 | 75.3% | 71.4% |
| 4214812 | 4.8.1.26 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › bPH_8 | 0.57 | 41.0 | 4.15e-01 | 75.3% | 78.4% |
| 3629491 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 35.0 | 4.15e-01 | 75.3% | 98.2% |
| 4380028 | 220.1.1.291 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_4 | 0.57 | 39.0 | 4.11e-01 | 78.7% | 81.2% |
| 4192693 | 220.1.1.76 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 | 0.53 | 37.0 | 3.78e-01 | 80.9% | 76.5% |
| 3899590 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 44.0 | 3.75e-01 | 95.5% | 85.2% |
| 3979983 | 2485.1.1.62 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › TrbC_Ftype | 0.53 | 46.0 | 3.96e-01 | 96.6% | 83.6% |
| 3454238 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.52 | 35.0 | 3.58e-01 | 74.2% | 71.8% |
| 3908749 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 42.0 | 3.68e-01 | 91.0% | 73.4% |
| 4528588 | 7520.1.1.1 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA | 0.52 | 44.0 | 3.68e-01 | 96.6% | 84.1% |
| 3722454 | 220.1.1.92 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Mcp5_PH | 0.52 | 44.0 | 3.74e-01 | 97.8% | 68.4% |
| 3765367 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 43.0 | 3.72e-01 | 95.5% | 70.0% |
| 3659150 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.83e-01 | 89.9% | 88.7% |
| 3709315 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 41.0 | 3.80e-01 | 91.0% | 75.8% |
| 1868804 | 7520.1.1.1 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA | 0.51 | 42.0 | 3.47e-01 | 94.4% | 78.0% |
| 3558010 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 40.0 | 3.73e-01 | 89.9% | 77.5% |
| 4159609 | 7520.1.1.1 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA | 0.50 | 41.0 | 3.50e-01 | 94.4% | 84.0% |
| 5059406 | 220.1.1.291 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_4 | 0.50 | 34.0 | 3.60e-01 | 79.8% | 82.7% |
| 3516025 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 40.0 | 3.84e-01 | 88.8% | 91.4% |
D2
high
residues 97-208
Domain cluster:
rep: MH533020.1__AXN57854.1__X__00123__D5-128