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SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00388
Bact-VirSR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00388
Identity
- Kingdom:
- phage
Quality
71.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 99-198_300-332
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mi8A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.92 | 89.0 | 8.74e-01 | 100.0% | 100.0% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.92 | 86.0 | 7.79e-01 | 97.0% | 100.0% |
| 1dq3A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.92 | 86.0 | 7.63e-01 | 97.0% | 100.0% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.91 | 84.0 | 8.24e-01 | 95.5% | 100.0% |
| 1zdeA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.91 | 88.0 | 8.12e-01 | 100.0% | 95.6% |
| 2cw8A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.90 | 84.0 | 7.61e-01 | 97.0% | 100.0% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.90 | 86.0 | 7.77e-01 | 99.2% | 98.8% |
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.90 | 85.0 | 7.49e-01 | 97.7% | 100.0% |
| 2lcjA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.89 | 83.0 | 7.25e-01 | 97.0% | 100.0% |
| 5o9iA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.89 | 83.0 | 7.48e-01 | 97.0% | 100.0% |
| 4lx3A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.89 | 66.0 | 7.55e-01 | 92.5% | 100.0% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.88 | 83.0 | 8.26e-01 | 98.5% | 99.3% |
| 2jmzA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.88 | 81.0 | 7.41e-01 | 97.0% | 100.0% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 81.0 | 7.91e-01 | 97.7% | 99.3% |
| 1at0A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 81.0 | 7.81e-01 | 98.5% | 100.0% |
| 6zgqA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.83 | 75.0 | 7.27e-01 | 95.5% | 100.0% |
| 1dfaA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.79 | 73.0 | 6.20e-01 | 97.0% | 100.0% |
| 4exoA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 37.0 | 3.57e-01 | 89.5% | 68.5% |
ECOD (97)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5065032 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.95 | 90.0 | 8.22e-01 | 97.0% | 100.0% |
| 4998394 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.94 | 85.0 | 8.00e-01 | 93.2% | 100.0% |
| 5023539 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.94 | 87.0 | 8.14e-01 | 95.5% | 100.0% |
| 4993732 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.94 | 85.0 | 8.77e-01 | 99.2% | 99.2% |
| 4872043 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.93 | 90.0 | 8.58e-01 | 100.0% | 99.3% |
| 3952464 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.93 | 90.0 | 8.72e-01 | 100.0% | 97.9% |
| 3282306 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.93 | 87.0 | 8.72e-01 | 97.0% | 100.0% |
| 4971400 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 88.0 | 6.55e-01 | 99.2% | 53.9% |
| 5030847 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 88.0 | 8.20e-01 | 99.2% | 95.0% |
| 2524072 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.92 | 87.0 | 7.90e-01 | 98.5% | 100.0% |
| 4392318 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.92 | 86.0 | 7.49e-01 | 96.2% | 100.0% |
| 4993128 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 88.0 | 8.16e-01 | 99.2% | 99.4% |
| 5029540 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.92 | 86.0 | 7.98e-01 | 97.0% | 100.0% |
| 4993853 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 86.0 | 7.88e-01 | 97.0% | 100.0% |
| 5002632 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 87.0 | 8.29e-01 | 97.7% | 99.3% |
| 2445477 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.92 | 89.0 | 8.36e-01 | 100.0% | 92.9% |
| 4992473 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.92 | 89.0 | 8.00e-01 | 100.0% | 94.1% |
| 4975503 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 86.0 | 7.61e-01 | 97.7% | 100.0% |
| 4979631 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 86.0 | 8.17e-01 | 97.0% | 100.0% |
| 4457379 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.92 | 88.0 | 8.48e-01 | 99.2% | 95.2% |
| 3604383 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 86.0 | 7.10e-01 | 97.7% | 99.5% |
| 4667152 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.91 | 88.0 | 8.19e-01 | 100.0% | 98.1% |
| 4940943 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 88.0 | 7.94e-01 | 100.0% | 100.0% |
| 4039971 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 87.0 | 7.81e-01 | 100.0% | 100.0% |
| 5035476 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 87.0 | 8.02e-01 | 98.5% | 99.4% |
| 4565870 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 87.0 | 8.21e-01 | 100.0% | 98.7% |
| 4979524 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 86.0 | 6.74e-01 | 98.5% | 99.2% |
| 5013937 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 86.0 | 7.84e-01 | 97.7% | 98.2% |
| 2323756 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 84.0 | 7.85e-01 | 96.2% | 100.0% |
| 4982797 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 87.0 | 8.40e-01 | 99.2% | 100.0% |
| 5013038 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 85.0 | 7.89e-01 | 97.7% | 99.4% |
| 5032319 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 85.0 | 8.14e-01 | 97.7% | 100.0% |
| 4993813 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 85.0 | 7.89e-01 | 97.7% | 100.0% |
| 4943231 | 69.1.1.16 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › ATP-synt_ab | 0.91 | 87.0 | 7.68e-01 | 100.0% | 100.0% |
| 4978263 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 87.0 | 7.96e-01 | 100.0% | 98.8% |
| 4335483 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.90 | 84.0 | 6.86e-01 | 97.0% | 100.0% |
| 4992651 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.90 | 86.0 | 7.92e-01 | 100.0% | 98.8% |
| 4997597 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.90 | 85.0 | 8.13e-01 | 98.5% | 98.7% |
| 4629526 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.90 | 84.0 | 6.19e-01 | 97.7% | 100.0% |
| 4930433 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.90 | 85.0 | 8.03e-01 | 99.2% | 100.0% |
| 4993480 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.90 | 85.0 | 7.89e-01 | 98.5% | 100.0% |
| 5078549 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.90 | 86.0 | 7.99e-01 | 100.0% | 99.4% |
| 4127166 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.90 | 84.0 | 7.98e-01 | 97.0% | 100.0% |
| 3963364 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.90 | 86.0 | 8.30e-01 | 99.2% | 100.0% |
| 3257888 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 84.0 | 8.02e-01 | 97.7% | 100.0% |
| 4586920 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 84.0 | 7.89e-01 | 97.7% | 100.0% |
| 4084747 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.89 | 84.0 | 6.06e-01 | 97.0% | 100.0% |
| 4940451 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 82.0 | 8.21e-01 | 95.5% | 100.0% |
| 4994372 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 78.0 | 8.26e-01 | 94.7% | 100.0% |
| 4945569 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 86.0 | 8.07e-01 | 100.0% | 98.7% |
| 3949431 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 84.0 | 7.97e-01 | 97.0% | 100.0% |
| 4544734 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 84.0 | 6.95e-01 | 97.0% | 100.0% |
| 4998392 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 84.0 | 7.72e-01 | 97.7% | 100.0% |
| 4060462 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 85.0 | 6.45e-01 | 100.0% | 98.2% |
| 5012699 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 82.0 | 7.44e-01 | 96.2% | 100.0% |
| 4779324 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 66.0 | 7.55e-01 | 92.5% | 100.0% |
| 4979989 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 85.0 | 7.53e-01 | 100.0% | 98.9% |
| 3949584 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 83.0 | 7.91e-01 | 97.0% | 100.0% |
| 4996523 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 84.0 | 7.11e-01 | 98.5% | 99.5% |
| 5028788 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 84.0 | 8.22e-01 | 98.5% | 99.3% |
| 4993927 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 78.0 | 7.41e-01 | 91.0% | 100.0% |
| 4948019 | 69.1.1.17 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM | 0.88 | 84.0 | 7.54e-01 | 100.0% | 98.9% |
| 259963 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.88 | 83.0 | 8.26e-01 | 98.5% | 99.3% |
| 4946209 | 69.1.1.18 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › DNA_topoisoIV | 0.88 | 83.0 | 6.95e-01 | 97.0% | 100.0% |
| 5030213 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 84.0 | 8.05e-01 | 100.0% | 96.0% |
| 3603291 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 84.0 | 7.53e-01 | 100.0% | 97.7% |
| 4993437 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 78.0 | 7.57e-01 | 91.7% | 100.0% |
| 4943244 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 81.0 | 7.40e-01 | 97.0% | 100.0% |
| 5028299 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 82.0 | 7.69e-01 | 97.7% | 100.0% |
| 5030499 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 82.0 | 7.79e-01 | 97.0% | 99.3% |
| 4930925 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.87 | 84.0 | 8.24e-01 | 100.0% | 100.0% |
| 5066163 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 81.0 | 8.00e-01 | 97.0% | 100.0% |
| 3934143 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.87 | 81.0 | 7.98e-01 | 97.0% | 100.0% |
| 2701967 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 81.0 | 8.07e-01 | 97.7% | 100.0% |
| 4993871 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 63.0 | 6.78e-01 | 74.4% | 100.0% |
| 4291841 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 80.0 | 7.30e-01 | 95.5% | 100.0% |
| 4070999 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.87 | 82.0 | 7.74e-01 | 99.2% | 96.1% |
| 3936057 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.86 | 81.0 | 7.63e-01 | 97.7% | 99.4% |
| 2636473 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 82.0 | 7.96e-01 | 100.0% | 99.3% |
| 2553113 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 79.0 | 8.05e-01 | 98.5% | 99.2% |
| 3518586 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.85 | 81.0 | 6.85e-01 | 100.0% | 78.5% |
| 4933756 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 79.0 | 7.73e-01 | 96.2% | 100.0% |
| 5014852 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 82.0 | 7.91e-01 | 100.0% | 99.3% |
| 3517362 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.85 | 79.0 | 7.69e-01 | 97.7% | 100.0% |
| 3877825 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.85 | 81.0 | 6.76e-01 | 100.0% | 80.0% |
| 4996401 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 79.0 | 7.36e-01 | 98.5% | 99.4% |
| 4322985 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.85 | 80.0 | 5.63e-01 | 98.5% | 38.3% |
| 3230518 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.84 | 79.0 | 7.47e-01 | 98.5% | 99.4% |
| 3603738 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 78.0 | 7.71e-01 | 97.0% | 100.0% |
| 5065932 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 78.0 | 7.66e-01 | 98.5% | 100.0% |
| 4975971 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 76.0 | 7.76e-01 | 95.5% | 100.0% |
| 5035795 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 77.0 | 7.51e-01 | 98.5% | 99.3% |
| 4404140 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 79.0 | 7.07e-01 | 100.0% | 98.3% |
| 4940699 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.82 | 77.0 | 7.27e-01 | 98.5% | 100.0% |
| 2546507 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.80 | 73.0 | 7.12e-01 | 97.0% | 100.0% |
| 4932851 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.76 | 71.0 | 7.09e-01 | 100.0% | 98.5% |
| 4416649 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.76 | 71.0 | 6.93e-01 | 99.2% | 100.0% |
D2
medium
residues 199-299
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 45.0 | 4.94e-01 | 93.1% | 81.2% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 38.0 | 4.60e-01 | 87.1% | 90.5% |
| 3oioA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 44.0 | 4.28e-01 | 71.3% | 97.3% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 4.74e-01 | 96.0% | 92.1% |
| 1y0uA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 41.0 | 4.33e-01 | 82.2% | 77.5% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 44.0 | 4.72e-01 | 95.0% | 88.5% |
| 2p6rA03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.60 | 49.0 | 3.81e-01 | 88.1% | 67.4% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.55 | 47.0 | 3.70e-01 | 96.0% | 96.8% |
| 2jrtA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 38.0 | 4.13e-01 | 73.3% | 89.5% |
| 1f5qB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 37.0 | 3.70e-01 | 74.3% | 69.7% |
| 3m1mA03 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.52 | 37.0 | 3.61e-01 | 73.3% | 75.5% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.52 | 37.0 | 3.91e-01 | 73.3% | 85.4% |
| 1w9rA00 | 1.20.58.440 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A | 0.50 | 34.0 | 3.28e-01 | 70.3% | 66.4% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.50 | 36.0 | 4.01e-01 | 85.1% | 98.7% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4961899 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.70 | 41.0 | 4.87e-01 | 80.2% | 89.2% |
| 5080109 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.65 | 39.0 | 4.49e-01 | 84.2% | 81.3% |
| 5026910 | 4156.1.1.6 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc | 0.64 | 50.0 | 4.40e-01 | 84.2% | 97.4% |
| 5003692 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.64 | 40.0 | 4.77e-01 | 86.1% | 95.4% |
| 3980379 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 51.0 | 5.01e-01 | 86.1% | 99.1% |
| 3945715 | 101.1.1.11 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 | 0.63 | 45.0 | 5.04e-01 | 95.0% | 98.7% |
| 4980214 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.62 | 48.0 | 4.41e-01 | 81.2% | 99.2% |
| 5005281 | 4156.1.1.6 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc | 0.62 | 48.0 | 4.21e-01 | 82.2% | 100.0% |
| 3227569 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.61 | 42.0 | 3.75e-01 | 79.2% | 48.0% |
| 3589414 | 101.1.1.11 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 | 0.61 | 42.0 | 4.59e-01 | 71.3% | 90.0% |
| 3587668 | 101.1.1.11 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 | 0.60 | 43.0 | 4.78e-01 | 79.2% | 100.0% |
| 4356531 | 4156.1.1.6 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Helicase_dom4_arc | 0.60 | 46.0 | 4.02e-01 | 82.2% | 100.0% |
| 3986364 | 101.1.1.11 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 | 0.59 | 46.0 | 4.81e-01 | 97.0% | 93.3% |
| 4013155 | 376.1.1.100 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF26148 | 0.57 | 38.0 | 3.71e-01 | 81.2% | 60.9% |
| 4497406 | 141.1.1.4 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_synth_C | 0.56 | 47.0 | 3.36e-01 | 95.0% | 81.9% |
| 4411012 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.54 | 38.0 | 3.22e-01 | 74.3% | 59.4% |
| 3210490 | 192.6.1.6 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › VPS18_RING_C | 0.53 | 36.0 | 3.74e-01 | 81.2% | 77.8% |
| 4996547 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 43.0 | 3.77e-01 | 92.1% | 76.1% |