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SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00407
Bact-VirSR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00407
Identity
- Kingdom:
- phage
Quality
70.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-168
Domain cluster:
rep: MW584211.1__QSM05137.1__PROPHIGD102-1_38__00038__D12-80_268-322
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1o3uA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.51 | 27.0 | 3.11e-01 | 100.0% | 69.2% |
D2
high
residues 173-245
Domain cluster:
rep: MW584211.1__QSM05137.1__PROPHIGD102-1_38__00038__D323-387
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4wd1A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.52 | 42.0 | 3.59e-01 | 91.8% | 86.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4098414 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.55 | 43.0 | 3.24e-01 | 89.0% | 57.9% |
| 3827935 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.51 | 31.0 | 3.50e-01 | 86.3% | 95.6% |
D3
medium
residues 272-379_458-482
D4
medium
residues 380-454