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SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00463
Bact-VirSR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00463
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-113
Domain cluster:
rep: MG752970.1__AVH85358.1__RsoM2USA_430__00430__D11-89
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6mrc100 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.70 | 65.0 | 6.13e-01 | 100.0% | 86.0% |
| 1g31A00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.69 | 64.0 | 5.87e-01 | 100.0% | 89.7% |
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.67 | 63.0 | 5.92e-01 | 100.0% | 88.8% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 39.0 | 4.45e-01 | 96.4% | 84.4% |
| 3ebeB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 43.0 | 3.52e-01 | 82.1% | 74.7% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 32.0 | 3.55e-01 | 72.6% | 74.2% |
| 4xhvA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 42.0 | 4.10e-01 | 100.0% | 79.8% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 33.0 | 3.12e-01 | 79.8% | 51.4% |
| 4mb7A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.51 | 37.0 | 3.30e-01 | 76.2% | 85.7% |
| 4me3A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 37.0 | 3.59e-01 | 77.4% | 99.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3594024 | 236.1.2.0 ↗ | beta barrels › GroES-like › GroES-related › GroES | 0.71 | 65.0 | 6.35e-01 | 100.0% | 90.0% |
| 4082853 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.71 | 67.0 | 6.39e-01 | 100.0% | 90.4% |
| 3252896 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.71 | 66.0 | 6.35e-01 | 100.0% | 92.6% |
| 4417276 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.69 | 64.0 | 6.03e-01 | 100.0% | 92.0% |
| 470 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.69 | 64.0 | 5.87e-01 | 100.0% | 89.7% |
| 4164629 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.62 | 55.0 | 4.18e-01 | 100.0% | 43.2% |
| 3736730 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.62 | 56.0 | 4.23e-01 | 100.0% | 64.6% |
| 3593831 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.60 | 55.0 | 4.07e-01 | 100.0% | 42.4% |
| 4319678 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.58 | 52.0 | 4.32e-01 | 100.0% | 80.7% |
| 3870119 | 2.1.1.119 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM10_OB | 0.58 | 46.0 | 3.71e-01 | 86.9% | 80.6% |
| 3208338 | 236.1.1.2 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 | 0.57 | 51.0 | 4.07e-01 | 100.0% | 50.6% |
| 5030363 | 2.1.1.80 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_OB | 0.55 | 40.0 | 3.67e-01 | 77.4% | 97.3% |
| 4029733 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 40.0 | 3.65e-01 | 79.8% | 93.0% |
| 5082734 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 40.0 | 3.54e-01 | 79.8% | 90.8% |
| 3722560 | 2.1.1.59 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 | 0.53 | 38.0 | 3.25e-01 | 75.0% | 79.0% |
| 5013993 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 38.0 | 3.51e-01 | 77.4% | 98.2% |
| 4993852 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 39.0 | 3.55e-01 | 79.8% | 98.2% |
| 3707381 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 37.0 | 3.34e-01 | 79.8% | 88.0% |
| 4550532 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.50 | 30.0 | 3.01e-01 | 71.4% | 56.7% |