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SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00475

Bact-Vir

SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00475

Identity

Kingdom:
phage

Quality

92.4 mean pLDDT

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-85
PDB
Domain cluster: rep: CAKLQF020000014.1__CAH1087275.1__SAMEA5780031_02655__00076__D18-108
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r94A00 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.80 74.0 7.00e-01 100.0% 91.8%
1x0gA00 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.74 67.0 6.27e-01 100.0% 80.4%
2apnA01 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.74 68.0 6.46e-01 100.0% 92.7%
2cr5A01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.58 34.0 3.53e-01 97.6% 60.0%
1q9jB02 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.54 46.0 3.64e-01 96.4% 83.9%
3qc8B00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 32.0 3.33e-01 95.2% 61.3%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4986614 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.83 78.0 7.44e-01 100.0% 94.7%
4583631 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.82 76.0 6.92e-01 100.0% 85.5%
3711451 80.1.1.0 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain 0.82 76.0 6.38e-01 100.0% 81.5%
3950006 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.81 76.0 6.91e-01 100.0% 83.3%
4159942 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.81 76.0 6.55e-01 100.0% 84.7%
3521437 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.80 75.0 6.78e-01 100.0% 81.7%
4974622 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.79 72.0 6.70e-01 100.0% 86.7%
4666947 80.1.1.0 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain 0.79 73.0 6.62e-01 100.0% 82.6%
4027419 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.77 70.0 6.39e-01 100.0% 85.3%
3271031 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.77 70.0 6.37e-01 100.0% 82.6%
5030194 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.76 71.0 6.43e-01 100.0% 78.2%
159214 80.1.1.1 ↗ beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn 0.75 69.0 6.18e-01 100.0% 78.1%
3726545 221.1.1.182 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBL_AVO1 0.57 32.0 3.31e-01 98.8% 56.2%
3459406 221.1.1.7 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.53 32.0 3.05e-01 98.8% 48.6%
3599444 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 31.0 3.22e-01 95.2% 62.7%
3420738 221.1.1.2 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.51 30.0 2.93e-01 96.4% 49.5%