←Back to structures
SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00499
Bact-VirSR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00499
Identity
- Kingdom:
- phage
Quality
47.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-102_122-197
D2
medium
residues 214-330
D3
medium
residues 331-455
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 69.0 | 6.00e-01 | 100.0% | 66.7% |
| 1a8dA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.75 | 69.0 | 5.48e-01 | 100.0% | 68.7% |
| 3asiA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 60.0 | 5.29e-01 | 100.0% | 61.2% |
| 6hoxA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 66.0 | 5.32e-01 | 100.0% | 71.1% |
| 3azwA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 65.0 | 5.26e-01 | 100.0% | 68.7% |
| 3o0wA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 62.0 | 5.03e-01 | 100.0% | 73.1% |
| 3juuA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 59.0 | 4.66e-01 | 100.0% | 72.0% |
| 3zypA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 60.0 | 4.99e-01 | 100.0% | 79.3% |
| 3ilfA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 59.0 | 4.66e-01 | 100.0% | 70.8% |
| 2a6vB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 58.0 | 4.89e-01 | 100.0% | 82.0% |
| 1mveA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.65 | 54.0 | 4.39e-01 | 94.4% | 47.1% |
| 6aiiA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.64 | 57.0 | 4.25e-01 | 100.0% | 69.1% |
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.63 | 29.0 | 3.75e-01 | 74.4% | 73.3% |
| 2cwsA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 57.0 | 4.69e-01 | 100.0% | 77.5% |
| 2wsuA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 51.0 | 4.97e-01 | 99.2% | 79.1% |
| 1vavA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 55.0 | 4.61e-01 | 100.0% | 80.6% |
| 2a5zA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 55.0 | 4.49e-01 | 100.0% | 73.6% |
| 3ecqA01 | 2.60.120.870 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 54.0 | 4.80e-01 | 98.4% | 78.7% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.60 | 54.0 | 4.46e-01 | 100.0% | 68.8% |
| 4asmB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 52.0 | 3.79e-01 | 100.0% | 75.1% |
| 5tkyA04 | 2.60.34.10 | Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › Substrate Binding Domain Of DNAk; Chain A, domain 1 | 0.55 | 41.0 | 4.28e-01 | 92.8% | 83.6% |
| 4qfwA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.51 | 46.0 | 3.62e-01 | 100.0% | 53.6% |
| 4c08A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.51 | 44.0 | 3.87e-01 | 94.4% | 66.7% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 31.0 | 3.49e-01 | 94.4% | 80.9% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.50 | 22.0 | 3.13e-01 | 89.6% | 89.3% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940720 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.81 | 77.0 | 5.10e-01 | 100.0% | 38.2% |
| 3523656 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.78 | 73.0 | 5.83e-01 | 100.0% | 66.5% |
| 3391692 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.77 | 72.0 | 5.80e-01 | 100.0% | 70.4% |
| 3527733 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.75 | 70.0 | 5.89e-01 | 100.0% | 73.0% |
| 3174990 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.75 | 58.0 | 4.84e-01 | 97.6% | 48.1% |
| 3898844 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.74 | 70.0 | 5.85e-01 | 100.0% | 74.0% |
| 3761305 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.74 | 69.0 | 5.79e-01 | 100.0% | 71.2% |
| 5080223 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.74 | 69.0 | 5.73e-01 | 100.0% | 75.7% |
| 3353038 | 10.1.1.3 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin | 0.73 | 67.0 | 5.17e-01 | 100.0% | 68.0% |
| 3415319 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.73 | 68.0 | 5.69e-01 | 100.0% | 70.7% |
| 3350200 | 362.1.1.1 ↗ | few secondary structure elements › P-domain of calnexin/calreticulin › P-domain of calnexin/calreticulin › P-domain of calnexin/calreticulin › Calreticulin | 0.73 | 67.0 | 4.59e-01 | 100.0% | 43.1% |
| 3944601 | 10.1.1.35 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_3 | 0.73 | 67.0 | 5.58e-01 | 100.0% | 67.6% |
| 4578889 | 10.1.1.3 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin | 0.73 | 67.0 | 5.10e-01 | 100.0% | 64.6% |
| 3265966 | 10.1.1.3 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin | 0.73 | 67.0 | 4.64e-01 | 100.0% | 48.1% |
| 2044712 | 10.1.1.1 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 | 0.72 | 61.0 | 5.29e-01 | 99.2% | 60.6% |
| 3500010 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.72 | 65.0 | 5.21e-01 | 97.6% | 59.6% |
| 2512825 | 10.1.1.25 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Toxin_R_bind_N | 0.71 | 66.0 | 5.37e-01 | 100.0% | 73.0% |
| 3544813 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.71 | 60.0 | 5.27e-01 | 98.4% | 61.6% |
| 3708395 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.69 | 63.0 | 4.97e-01 | 100.0% | 74.5% |
| 3700772 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.67 | 60.0 | 5.03e-01 | 98.4% | 58.5% |
| 3704753 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.66 | 58.0 | 4.63e-01 | 93.6% | 57.5% |
| 3482450 | 10.1.1.1 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 | 0.66 | 57.0 | 4.91e-01 | 100.0% | 59.0% |
| 4640223 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.66 | 55.0 | 4.45e-01 | 94.4% | 46.5% |
| 3703666 | 10.1.1.56 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C | 0.66 | 59.0 | 5.36e-01 | 100.0% | 95.9% |
| 3644106 | 10.1.1.3 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Calreticulin | 0.63 | 51.0 | 4.75e-01 | 85.6% | 74.5% |
| 3743522 | 10.1.1.19 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like | 0.62 | 55.0 | 4.72e-01 | 100.0% | 81.5% |
| 3228176 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.62 | 54.0 | 5.04e-01 | 98.4% | 84.4% |
| 4002095 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.55 | 40.0 | 3.73e-01 | 100.0% | 60.6% |
| 4999431 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 29.0 | 3.30e-01 | 82.4% | 67.4% |