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SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00016
Bact-VirSR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00016
Identity
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-102
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1br2A04 | 1.20.58.530 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 42.0 | 3.36e-01 | 90.4% | 88.6% |
| 3udcA02 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 33.0 | 3.77e-01 | 91.8% | 90.0% |
| 6vhyC01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.53 | 39.0 | 2.56e-01 | 83.6% | 34.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5071572 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 40.0 | 4.17e-01 | 91.8% | 70.8% |
| 5004516 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.57 | 36.0 | 3.17e-01 | 100.0% | 43.8% |
| 3230533 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 29.0 | 3.49e-01 | 94.5% | 80.0% |
| 3521805 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.54 | 37.0 | 3.73e-01 | 91.8% | 70.7% |
| 4554867 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.52 | 31.0 | 3.26e-01 | 93.2% | 66.2% |