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SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00080
Bact-VirSR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00080
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-85
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06233.18 best | Usg | 74.2 | 1.10e-20 | 100.0% | 82.5% |
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zoqC00 | 6.20.250.30 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.86 | 58.0 | 6.52e-01 | 84.1% | 90.6% |
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.71 | 55.0 | 4.56e-01 | 100.0% | 47.9% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.70 | 51.0 | 5.45e-01 | 82.6% | 88.3% |
| 1iarB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 50.0 | 4.60e-01 | 100.0% | 57.6% |
| 3up1A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 51.0 | 4.49e-01 | 100.0% | 54.8% |
| 1vwxS02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 50.0 | 4.89e-01 | 88.4% | 75.0% |
| 1blwA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 51.0 | 4.50e-01 | 100.0% | 56.9% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 46.0 | 4.35e-01 | 100.0% | 61.3% |
| 1va9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 50.0 | 4.21e-01 | 100.0% | 46.7% |
| 3v6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 47.0 | 4.43e-01 | 100.0% | 60.9% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.65 | 51.0 | 4.42e-01 | 87.0% | 57.8% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.65 | 51.0 | 4.31e-01 | 87.0% | 59.7% |
| 1t4aA00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.65 | 48.0 | 4.63e-01 | 79.7% | 100.0% |
| 6usmB01 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.65 | 48.0 | 3.77e-01 | 79.7% | 85.7% |
| 5hdwA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.65 | 57.0 | 4.64e-01 | 100.0% | 53.4% |
| 3qvnA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.64 | 50.0 | 4.20e-01 | 100.0% | 49.6% |
| 3waiA02 | 2.60.40.3390 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 49.0 | 4.44e-01 | 100.0% | 61.3% |
| 1xvsA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.64 | 54.0 | 4.54e-01 | 100.0% | 54.5% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.63 | 47.0 | 4.62e-01 | 84.1% | 73.7% |
| 2vvlA02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.63 | 50.0 | 3.57e-01 | 88.4% | 39.2% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.63 | 49.0 | 4.41e-01 | 87.0% | 60.2% |
| 2f1eA00 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.63 | 54.0 | 4.62e-01 | 100.0% | 58.6% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.63 | 55.0 | 4.55e-01 | 100.0% | 55.7% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.63 | 48.0 | 4.22e-01 | 92.8% | 54.1% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.62 | 51.0 | 4.58e-01 | 94.2% | 65.6% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.61 | 49.0 | 4.95e-01 | 92.8% | 88.7% |
| 2wq4A01 | 2.60.120.760 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 49.0 | 3.99e-01 | 88.4% | 70.5% |
| 2hw4A01 | 3.50.20.20 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Janus/Ocnus | 0.60 | 53.0 | 4.59e-01 | 100.0% | 65.5% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.60 | 49.0 | 3.40e-01 | 98.6% | 26.3% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.60 | 52.0 | 4.49e-01 | 100.0% | 61.3% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.59 | 51.0 | 3.93e-01 | 100.0% | 92.2% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 52.0 | 3.37e-01 | 100.0% | 41.0% |
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.59 | 48.0 | 4.21e-01 | 100.0% | 59.3% |
| 3hvnA01 | 3.90.840.10 | Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain | 0.58 | 49.0 | 3.79e-01 | 98.6% | 66.9% |
| 3wnoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 3.91e-01 | 100.0% | 56.0% |
| 4a18X01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 47.0 | 4.50e-01 | 91.3% | 77.2% |
| 2nytD00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.58 | 52.0 | 3.84e-01 | 100.0% | 64.2% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.58 | 50.0 | 4.64e-01 | 100.0% | 93.5% |
| 8afoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 3.87e-01 | 100.0% | 60.2% |
| 1nc7A00 | 2.60.290.11 | Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like | 0.58 | 51.0 | 4.33e-01 | 100.0% | 79.3% |
| 3vmnA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 47.0 | 4.08e-01 | 100.0% | 57.7% |
| 1xhnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 48.0 | 3.73e-01 | 100.0% | 51.8% |
| 6se8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.20e-01 | 100.0% | 67.6% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.56 | 48.0 | 4.44e-01 | 100.0% | 93.6% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 49.0 | 3.22e-01 | 100.0% | 37.0% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 46.0 | 4.24e-01 | 100.0% | 68.8% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 41.0 | 3.61e-01 | 81.2% | 68.6% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.55 | 46.0 | 3.65e-01 | 100.0% | 52.2% |
| 2hj1A00 | 3.10.20.280 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RnfH-like | 0.54 | 40.0 | 3.96e-01 | 100.0% | 74.0% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.54 | 44.0 | 4.22e-01 | 95.7% | 100.0% |
| 2wy3B00 | 2.60.40.1990 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 3.77e-01 | 100.0% | 56.2% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 45.0 | 3.61e-01 | 100.0% | 47.1% |
| 1r5tA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 46.0 | 3.72e-01 | 100.0% | 65.2% |
| 2fr5A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 46.0 | 3.73e-01 | 100.0% | 64.7% |
| 2je8A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 3.85e-01 | 100.0% | 60.9% |
| 2arzA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 44.0 | 3.52e-01 | 100.0% | 46.7% |
| 5z1aA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 44.0 | 3.72e-01 | 100.0% | 56.8% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.51 | 37.0 | 3.07e-01 | 87.0% | 40.6% |
| 4qkbA00 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.51 | 37.0 | 2.80e-01 | 79.7% | 90.5% |
ECOD (85)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4673268 | 3115.1.1.8 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Usg | 0.97 | 76.0 | 8.20e-01 | 81.2% | 93.3% |
| 3287357 | 3115.3.1.0 ↗ | a+b two layers › GP2-like › P56 › P56 | 0.74 | 57.0 | 6.13e-01 | 82.6% | 98.3% |
| 5013194 | 3115.4.1.0 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 | 0.73 | 54.0 | 5.96e-01 | 79.7% | 100.0% |
| 3508212 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.72 | 56.0 | 5.64e-01 | 88.4% | 84.3% |
| 4116356 | 304.43.1.2 ↗ | a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 › Isocitrate_DH_C_bact | 0.71 | 64.0 | 5.43e-01 | 98.6% | 95.4% |
| 5012895 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.70 | 52.0 | 5.63e-01 | 82.6% | 98.2% |
| 3878947 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.70 | 52.0 | 4.85e-01 | 100.0% | 64.7% |
| 3508990 | 3115.3.1.2 ↗ | a+b two layers › GP2-like › P56 › P56 › DUF2922 | 0.69 | 52.0 | 5.42e-01 | 81.2% | 98.4% |
| 3955717 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.69 | 56.0 | 4.59e-01 | 88.4% | 53.6% |
| 3543785 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 51.0 | 4.63e-01 | 100.0% | 57.9% |
| 3963714 | 304.28.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › Sec_GG | 0.69 | 53.0 | 4.97e-01 | 82.6% | 91.8% |
| 3514371 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.69 | 62.0 | 4.25e-01 | 97.1% | 78.1% |
| 5049412 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.68 | 54.0 | 4.47e-01 | 88.4% | 48.0% |
| 4281749 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.68 | 54.0 | 4.47e-01 | 89.9% | 49.2% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 52.0 | 5.54e-01 | 88.4% | 96.6% |
| 4084879 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 52.0 | 4.87e-01 | 84.1% | 70.6% |
| 4939155 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.67 | 54.0 | 4.48e-01 | 88.4% | 50.4% |
| 3987406 | 3115.6.1.1 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY | 0.67 | 55.0 | 5.38e-01 | 97.1% | 82.7% |
| 3543786 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 51.0 | 4.63e-01 | 100.0% | 60.0% |
| 3227513 | 3115.1.1.3 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › NRF | 0.66 | 52.0 | 4.60e-01 | 88.4% | 57.1% |
| 4977520 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.66 | 53.0 | 4.55e-01 | 88.4% | 54.5% |
| 3913545 | 11.1.1.129 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind | 0.66 | 51.0 | 4.33e-01 | 100.0% | 50.4% |
| 4659266 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.66 | 52.0 | 4.52e-01 | 88.4% | 54.5% |
| 3287138 | 303.1.1.1 ↗ | a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC | 0.66 | 56.0 | 4.34e-01 | 95.7% | 43.9% |
| 3345090 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 50.0 | 4.36e-01 | 88.4% | 52.8% |
| 4996552 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 50.0 | 4.72e-01 | 85.5% | 67.1% |
| 3909457 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 52.0 | 4.59e-01 | 100.0% | 57.1% |
| 2512518 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.66 | 50.0 | 4.45e-01 | 88.4% | 56.4% |
| 2831852 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 50.0 | 4.44e-01 | 88.4% | 56.4% |
| 4967222 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 51.0 | 5.34e-01 | 91.3% | 96.7% |
| 5074648 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.65 | 49.0 | 4.80e-01 | 88.4% | 76.0% |
| 4568546 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.65 | 51.0 | 4.30e-01 | 87.0% | 52.9% |
| 4648475 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.65 | 51.0 | 5.36e-01 | 87.0% | 98.3% |
| 4093321 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.64 | 51.0 | 4.37e-01 | 88.4% | 56.5% |
| 5030993 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.64 | 50.0 | 4.80e-01 | 91.3% | 73.8% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.64 | 49.0 | 5.12e-01 | 87.0% | 93.7% |
| 4031279 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.64 | 51.0 | 4.06e-01 | 88.4% | 42.9% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 50.0 | 5.08e-01 | 91.3% | 85.7% |
| 3219033 | 11.1.1.593 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › INTS7_C | 0.64 | 52.0 | 4.40e-01 | 100.0% | 52.5% |
| 4615128 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 49.0 | 3.81e-01 | 82.6% | 58.0% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.64 | 51.0 | 5.21e-01 | 88.4% | 92.3% |
| 1515950 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.64 | 52.0 | 4.52e-01 | 91.3% | 84.3% |
| 3603592 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 53.0 | 3.45e-01 | 95.7% | 34.8% |
| 5053865 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.63 | 55.0 | 5.11e-01 | 100.0% | 95.6% |
| 3409700 | 4114.1.1.2 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › Ocnus | 0.63 | 54.0 | 4.68e-01 | 100.0% | 65.2% |
| 3593981 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.63 | 50.0 | 4.43e-01 | 94.2% | 59.0% |
| 4333681 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.63 | 51.0 | 4.35e-01 | 92.8% | 55.8% |
| 3931864 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 49.0 | 4.20e-01 | 100.0% | 51.7% |
| 4418109 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.62 | 50.0 | 3.99e-01 | 88.4% | 45.5% |
| 2106284 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.62 | 51.0 | 5.17e-01 | 91.3% | 94.0% |
| 3265857 | 299.1.1.0 ↗ | a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain | 0.62 | 44.0 | 3.87e-01 | 100.0% | 48.2% |
| 3231372 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.62 | 49.0 | 3.98e-01 | 88.4% | 45.4% |
| 223776 | 3115.4.1.1 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 | 0.62 | 48.0 | 4.79e-01 | 92.8% | 83.1% |
| 4929538 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.62 | 54.0 | 5.01e-01 | 95.7% | 89.4% |
| 3394311 | 4114.1.1.2 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › Ocnus | 0.62 | 53.0 | 4.64e-01 | 100.0% | 69.1% |
| 3605278 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 52.0 | 4.16e-01 | 100.0% | 97.4% |
| 3223735 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.61 | 45.0 | 3.80e-01 | 88.4% | 45.8% |
| 3242735 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 44.0 | 3.90e-01 | 100.0% | 51.4% |
| 3727692 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 49.0 | 3.66e-01 | 100.0% | 34.6% |
| 4199730 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.60 | 52.0 | 4.56e-01 | 100.0% | 67.6% |
| 4668972 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.59 | 52.0 | 3.83e-01 | 100.0% | 59.6% |
| 5041017 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 47.0 | 4.34e-01 | 92.8% | 67.8% |
| 3528793 | 11.1.1.102 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › A2M_BRD | 0.59 | 47.0 | 4.02e-01 | 100.0% | 53.0% |
| 3790333 | 11.1.1.1009 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26432 | 0.59 | 44.0 | 3.32e-01 | 100.0% | 30.5% |
| 3584885 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.59 | 44.0 | 4.67e-01 | 100.0% | 91.7% |
| 4031235 | 3986.2.1.2 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › DUF2922 | 0.58 | 49.0 | 4.95e-01 | 100.0% | 94.3% |
| 3694098 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 48.0 | 4.18e-01 | 100.0% | 87.5% |
| 3412169 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 3.90e-01 | 100.0% | 57.1% |
| 3248639 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.56 | 42.0 | 3.76e-01 | 100.0% | 56.0% |
| 2557261 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.56 | 45.0 | 4.11e-01 | 88.4% | 72.8% |
| 4398485 | 821.1.1.1 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG | 0.56 | 47.0 | 3.32e-01 | 100.0% | 46.4% |
| 4973922 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.56 | 43.0 | 3.91e-01 | 84.1% | 83.2% |
| 4644377 | 223.1.1.122 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HisKA | 0.56 | 40.0 | 2.82e-01 | 76.8% | 70.2% |
| 2859021 | 11.1.1.139 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Iron_transport | 0.56 | 48.0 | 3.71e-01 | 100.0% | 50.3% |
| 3874464 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.55 | 45.0 | 2.96e-01 | 95.7% | 68.2% |
| 4945197 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 41.0 | 3.33e-01 | 81.2% | 71.4% |
| 3786313 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 47.0 | 3.39e-01 | 100.0% | 40.0% |
| 3249979 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.55 | 44.0 | 3.55e-01 | 89.9% | 47.9% |
| 4324562 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.54 | 48.0 | 3.57e-01 | 100.0% | 62.8% |
| 3624434 | 821.1.1.8 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › ANKLE2_3rd | 0.54 | 46.0 | 3.45e-01 | 100.0% | 53.5% |
| 3578019 | 821.1.1.8 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › ANKLE2_3rd | 0.53 | 46.0 | 4.07e-01 | 100.0% | 94.3% |
| 4029586 | 10.32.1.203 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin | 0.53 | 45.0 | 3.58e-01 | 97.1% | 74.7% |
| 3805299 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.53 | 44.0 | 2.93e-01 | 95.7% | 100.0% |
| 3378079 | 207.1.1.119 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_13 | 0.52 | 45.0 | 2.68e-01 | 100.0% | 13.7% |
| 4001904 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.50 | 35.0 | 3.21e-01 | 73.9% | 77.9% |