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SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00138
Bact-VirSR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00138
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-73
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 40.0 | 3.94e-01 | 100.0% | 58.7% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 39.0 | 3.83e-01 | 100.0% | 57.5% |
| 4c92F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 40.0 | 3.88e-01 | 100.0% | 58.4% |
| 5mkiH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 35.0 | 3.52e-01 | 100.0% | 56.3% |
| 3ty5A01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.58 | 45.0 | 3.02e-01 | 91.2% | 46.1% |
| 1d3bC00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 36.0 | 3.61e-01 | 100.0% | 60.6% |
| 2irpA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.57 | 47.0 | 3.45e-01 | 97.1% | 85.0% |
| 3pggA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 38.0 | 3.64e-01 | 100.0% | 60.3% |
| 3hm4A00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.55 | 42.0 | 3.33e-01 | 85.3% | 71.9% |
| 1n0eA00 | 3.40.1550.20 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › Transcriptional regulator MraZ domain | 0.54 | 47.0 | 3.79e-01 | 100.0% | 56.0% |
| 6btdA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.54 | 45.0 | 3.32e-01 | 97.1% | 77.8% |
| 2qyuA03 | 3.40.1850.10 | Alpha Beta › 3-Layer(aba) Sandwich › HECT-like ubiquitin ligase fold › HECT-like ubiquitin ligase | 0.52 | 35.0 | 3.48e-01 | 100.0% | 64.0% |
| 1jdiA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.52 | 41.0 | 3.00e-01 | 91.2% | 74.0% |
| 2opiA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.52 | 40.0 | 3.02e-01 | 91.2% | 77.7% |
| 1uliA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.50 | 36.0 | 2.46e-01 | 79.4% | 80.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5051960 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 48.0 | 3.70e-01 | 75.0% | 72.9% |
| 3167630 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.65 | 42.0 | 3.98e-01 | 100.0% | 56.2% |
| 3838098 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.56 | 46.0 | 3.39e-01 | 94.1% | 80.0% |
| 5026560 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.56 | 46.0 | 3.40e-01 | 94.1% | 77.9% |
| 4058682 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.56 | 49.0 | 3.90e-01 | 100.0% | 54.3% |
| 5000115 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.55 | 45.0 | 3.44e-01 | 95.6% | 84.4% |
| 3963810 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.55 | 48.0 | 3.83e-01 | 100.0% | 57.1% |
| 3957351 | 1.1.3.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ | 0.54 | 47.0 | 3.85e-01 | 100.0% | 58.5% |
| 4933877 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.52 | 40.0 | 2.97e-01 | 91.2% | 72.6% |
| 4654790 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.51 | 39.0 | 2.96e-01 | 91.2% | 82.8% |
| 3712748 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 38.0 | 3.34e-01 | 86.8% | 73.9% |