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SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00301
Bact-VirSR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00301
Identity
- Kingdom:
- phage
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-118
Domain cluster:
rep: ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00132__D29-77_93-127
D2
high
residues 133-264
D3
high
residues 465-662
Domain cluster:
rep: IMGVR_UViG_3300033463_000002-3300033463-Ga0310690_10000036376__D94-280
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01464.26 best | SLT | 43.1 | 4.00e-11 | 65.7% | 71.8% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.90 | 80.0 | 8.38e-01 | 93.9% | 98.9% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.85 | 62.0 | 6.94e-01 | 91.9% | 93.0% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.82 | 64.0 | 6.86e-01 | 95.5% | 91.9% |
| 3w6bB00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.81 | 59.0 | 6.66e-01 | 94.9% | 96.1% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.79 | 59.0 | 6.56e-01 | 89.4% | 93.8% |
| 153lA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.79 | 59.0 | 6.12e-01 | 96.0% | 81.6% |
| 7k5cB01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.78 | 52.0 | 5.77e-01 | 84.3% | 83.6% |
| 1xsfA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.74 | 34.0 | 4.52e-01 | 83.3% | 78.7% |
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.74 | 61.0 | 6.61e-01 | 89.4% | 100.0% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.73 | 62.0 | 6.45e-01 | 91.9% | 95.6% |
| 4fdyA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.70 | 55.0 | 6.08e-01 | 91.4% | 100.0% |
| 4qdnA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.70 | 42.0 | 5.35e-01 | 95.5% | 100.0% |
| 2zycA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.67 | 37.0 | 4.91e-01 | 100.0% | 100.0% |
| 3fi7A01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.67 | 44.0 | 5.29e-01 | 97.0% | 100.0% |
| 1hfxA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.66 | 41.0 | 5.11e-01 | 98.5% | 99.2% |
| 4kt3A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.65 | 45.0 | 5.31e-01 | 98.0% | 99.3% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.59 | 42.0 | 4.80e-01 | 79.8% | 96.6% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 30.0 | 3.39e-01 | 82.3% | 70.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1175858 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.90 | 80.0 | 8.23e-01 | 93.9% | 95.2% |
| 3965879 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.84 | 63.0 | 6.92e-01 | 93.9% | 91.5% |
| 3964630 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.84 | 55.0 | 6.05e-01 | 95.5% | 79.9% |
| 3941811 | 235.1.1.32 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 | 0.82 | 63.0 | 6.84e-01 | 93.4% | 91.8% |
| 3254511 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.81 | 42.0 | 5.89e-01 | 89.4% | 97.1% |
| 1005039 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 59.0 | 6.55e-01 | 95.5% | 93.0% |
| 3279121 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 39.0 | 5.69e-01 | 84.8% | 100.0% |
| 3260862 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.79 | 43.0 | 5.72e-01 | 93.9% | 95.5% |
| 3979308 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.79 | 65.0 | 6.96e-01 | 91.4% | 97.1% |
| 3970721 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.77 | 65.0 | 6.95e-01 | 100.0% | 99.4% |
| 4455133 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.77 | 36.0 | 5.30e-01 | 89.4% | 100.0% |
| 3971115 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.77 | 63.0 | 6.82e-01 | 95.5% | 99.4% |
| 3166094 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.73 | 63.0 | 6.68e-01 | 95.5% | 100.0% |
| 4515466 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.73 | 64.0 | 6.68e-01 | 97.5% | 100.0% |
| 4258903 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.72 | 58.0 | 6.33e-01 | 88.9% | 98.8% |
| 4530587 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.72 | 62.0 | 6.41e-01 | 90.9% | 95.7% |
| 3720940 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.71 | 53.0 | 5.67e-01 | 93.4% | 86.3% |
| 2393514 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.71 | 62.0 | 6.39e-01 | 94.4% | 95.3% |
| 3205219 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.69 | 52.0 | 5.60e-01 | 91.4% | 88.8% |
| 3657952 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.65 | 57.0 | 5.71e-01 | 95.5% | 90.5% |
| 5021331 | 3352.1.1.1 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 | 0.51 | 41.0 | 3.09e-01 | 85.9% | 95.1% |
D4
high
residues 682-813
Domain cluster:
rep: NC_041949.1__YP_009603225.1__FDH66_gp61__00037__D5-161
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g6zA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 28.0 | 3.65e-01 | 90.9% | 81.4% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 32.0 | 4.09e-01 | 77.3% | 96.0% |
| 1i1jB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 33.0 | 3.71e-01 | 100.0% | 74.0% |
| 1m4zA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.53 | 37.0 | 3.29e-01 | 72.0% | 67.3% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.52 | 33.0 | 2.97e-01 | 91.7% | 44.0% |
| 2avwD01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 45.0 | 4.45e-01 | 100.0% | 92.9% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3612090 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 35.0 | 5.10e-01 | 72.0% | 98.3% |
| 3616769 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.71 | 36.0 | 4.27e-01 | 73.5% | 68.4% |
| 3810562 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 37.0 | 4.76e-01 | 72.0% | 93.3% |
| 4000622 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.64 | 36.0 | 3.79e-01 | 73.5% | 60.0% |
| 4386702 | 219.1.1.45 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Mac-1 | 0.62 | 56.0 | 4.38e-01 | 100.0% | 94.8% |
| 296086 | 219.1.1.45 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Mac-1 | 0.62 | 56.0 | 4.33e-01 | 100.0% | 91.9% |
| 3180573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 41.0 | 4.70e-01 | 80.3% | 94.7% |
| 3505711 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.61 | 34.0 | 4.14e-01 | 72.7% | 84.7% |
| 3645842 | 4.1.1.162 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF502 | 0.61 | 32.0 | 3.97e-01 | 100.0% | 82.5% |
| 4944596 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.61 | 45.0 | 4.66e-01 | 91.7% | 81.6% |
| 4879299 | 219.1.1.45 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Mac-1 | 0.60 | 51.0 | 4.26e-01 | 91.7% | 94.4% |
| 3678872 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.59 | 33.0 | 4.30e-01 | 70.5% | 97.3% |
| 3188394 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.58 | 40.0 | 4.18e-01 | 72.7% | 77.5% |
| 3205559 | 4.8.1.22 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 | 0.56 | 37.0 | 3.66e-01 | 72.7% | 61.4% |
| 3650798 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 36.0 | 3.90e-01 | 74.2% | 80.0% |
| 3624306 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.52 | 36.0 | 3.70e-01 | 72.7% | 73.6% |
| 3631313 | 4.1.1.225 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7025 | 0.52 | 35.0 | 3.13e-01 | 73.5% | 46.8% |
| 4015757 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 35.0 | 3.04e-01 | 73.5% | 42.9% |
| 3794500 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.52 | 42.0 | 3.78e-01 | 87.1% | 69.2% |
| 3598499 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 38.0 | 3.71e-01 | 75.0% | 96.4% |
| 3190056 | 4.23.1.0 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like | 0.52 | 38.0 | 3.68e-01 | 75.8% | 72.4% |