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SR-VP_0-2_scaffold_141_4953755_prodigal-single.1__X__X__00252
Bact-VirSR-VP_0-2_scaffold_141_4953755_prodigal-single.1__X__X__00252
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-83
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 54.0 | 5.70e-01 | 85.7% | 82.4% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.77 | 46.0 | 5.49e-01 | 85.7% | 90.4% |
| 1vwxM01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 47.0 | 4.60e-01 | 85.7% | 57.6% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 52.0 | 4.92e-01 | 94.8% | 61.1% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.74 | 47.0 | 5.50e-01 | 87.0% | 92.6% |
| 1zuyA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 53.0 | 6.06e-01 | 84.4% | 100.0% |
| 1yn8A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 53.0 | 5.95e-01 | 85.7% | 98.3% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 43.0 | 4.93e-01 | 84.4% | 83.9% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 52.0 | 5.55e-01 | 87.0% | 91.0% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 51.0 | 5.57e-01 | 85.7% | 96.7% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 49.0 | 5.42e-01 | 84.4% | 95.0% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 50.0 | 5.46e-01 | 85.7% | 93.5% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 45.0 | 5.02e-01 | 85.7% | 87.9% |
| 4epcA01 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 54.0 | 5.31e-01 | 84.4% | 82.7% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 49.0 | 4.25e-01 | 87.0% | 49.6% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 53.0 | 5.70e-01 | 92.2% | 97.0% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 50.0 | 4.63e-01 | 89.6% | 62.5% |
| 6bioA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 48.0 | 5.44e-01 | 79.2% | 100.0% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 50.0 | 5.39e-01 | 85.7% | 95.3% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 51.0 | 5.34e-01 | 85.7% | 94.1% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 52.0 | 5.22e-01 | 87.0% | 84.6% |
| 1m9sA04 | 2.30.30.170 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 52.0 | 5.02e-01 | 85.7% | 83.7% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 51.0 | 5.41e-01 | 84.4% | 100.0% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 47.0 | 4.44e-01 | 85.7% | 65.2% |
| 4o5vA03 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.63 | 48.0 | 4.84e-01 | 85.7% | 82.9% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 50.0 | 5.05e-01 | 89.6% | 100.0% |
| 3e19B01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.61 | 46.0 | 4.92e-01 | 85.7% | 100.0% |
| 1bcoA02 | 2.30.30.130 | Mainly Beta › Roll › SH3 type barrels. › Transposase, Mu, C-terminal | 0.57 | 40.0 | 4.26e-01 | 75.3% | 98.5% |
| 1u2kA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.56 | 44.0 | 3.81e-01 | 88.3% | 93.0% |
| 1kz7C02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 42.0 | 3.54e-01 | 83.1% | 84.7% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.55 | 43.0 | 4.04e-01 | 85.7% | 82.1% |
| 4govA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 43.0 | 3.62e-01 | 85.7% | 95.4% |
| 5amhA00 | 2.170.150.20 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › Peptide methionine sulfoxide reductase. | 0.54 | 39.0 | 3.55e-01 | 76.6% | 76.4% |
| 2dtcA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 43.0 | 3.75e-01 | 85.7% | 79.3% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 42.0 | 3.75e-01 | 87.0% | 93.0% |
| 2rloA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 40.0 | 3.49e-01 | 83.1% | 97.7% |
| 1u9tA02 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 40.0 | 3.17e-01 | 81.8% | 57.4% |
| 4ae7A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 37.0 | 2.87e-01 | 74.0% | 48.9% |
| 1birA00 | 3.10.450.30 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases | 0.52 | 39.0 | 3.54e-01 | 79.2% | 58.7% |
| 4a6fA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 38.0 | 3.50e-01 | 79.2% | 94.3% |
| 1rtuA00 | 3.10.450.30 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases | 0.52 | 38.0 | 3.42e-01 | 79.2% | 62.3% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 39.0 | 3.51e-01 | 83.1% | 88.2% |
| 3sxxD02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.31e-01 | 76.6% | 72.5% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 39.0 | 3.45e-01 | 88.3% | 90.3% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.50 | 33.0 | 3.66e-01 | 100.0% | 91.2% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4571610 | 4.1.1.245 ↗ | beta barrels › SH3 › SH3 › SH3 › SspH | 0.79 | 45.0 | 5.10e-01 | 85.7% | 74.6% |
| 3550644 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 47.0 | 5.43e-01 | 85.7% | 89.1% |
| 3842631 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.75 | 50.0 | 5.26e-01 | 85.7% | 75.7% |
| 3523802 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 50.0 | 5.57e-01 | 85.7% | 88.3% |
| 3788021 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.74 | 54.0 | 5.49e-01 | 85.7% | 78.7% |
| 3554293 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.72 | 52.0 | 5.65e-01 | 85.7% | 89.2% |
| 3665882 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 48.0 | 3.98e-01 | 88.3% | 39.3% |
| 3575066 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.72 | 52.0 | 5.84e-01 | 83.1% | 98.3% |
| 3789233 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.71 | 51.0 | 5.48e-01 | 85.7% | 89.2% |
| 3464886 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.71 | 48.0 | 5.39e-01 | 87.0% | 90.0% |
| 3879172 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.71 | 52.0 | 5.64e-01 | 85.7% | 92.3% |
| 5037939 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.71 | 46.0 | 3.64e-01 | 85.7% | 33.5% |
| 3627275 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 52.0 | 5.78e-01 | 84.4% | 100.0% |
| 4410756 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.70 | 52.0 | 4.25e-01 | 89.6% | 44.4% |
| 3570369 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.70 | 48.0 | 4.51e-01 | 87.0% | 60.0% |
| 3993273 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.69 | 52.0 | 4.44e-01 | 90.9% | 50.8% |
| 3710561 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.69 | 52.0 | 5.57e-01 | 84.4% | 95.4% |
| 3563220 | 4.1.1.220 ↗ | beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor | 0.68 | 47.0 | 4.69e-01 | 85.7% | 68.8% |
| 3814411 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 47.0 | 4.24e-01 | 87.0% | 53.3% |
| 3789696 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 51.0 | 4.83e-01 | 90.9% | 67.8% |
| 3607307 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.68 | 53.0 | 5.50e-01 | 87.0% | 91.4% |
| 1263753 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.68 | 49.0 | 5.42e-01 | 87.0% | 98.3% |
| 3520216 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.67 | 51.0 | 5.41e-01 | 85.7% | 91.3% |
| 5029166 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 54.0 | 5.49e-01 | 85.7% | 90.5% |
| 3435006 | 4.1.1.308 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31073 | 0.66 | 47.0 | 5.10e-01 | 84.4% | 87.7% |
| 4093354 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.66 | 51.0 | 5.39e-01 | 85.7% | 91.4% |
| 3514345 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 52.0 | 5.59e-01 | 87.0% | 100.0% |
| 3763497 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 53.0 | 5.37e-01 | 87.0% | 88.0% |
| 4013324 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 49.0 | 5.16e-01 | 87.0% | 87.1% |
| 5008254 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.64 | 47.0 | 4.95e-01 | 84.4% | 87.1% |
| 3798523 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.64 | 51.0 | 5.09e-01 | 85.7% | 95.0% |
| 3594811 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 50.0 | 5.35e-01 | 83.1% | 98.5% |
| 3500084 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 49.0 | 5.14e-01 | 84.4% | 91.4% |
| 3765502 | 4.1.1.50 ↗ | beta barrels › SH3 › SH3 › SH3 › MIB_HERC2 | 0.62 | 49.0 | 4.47e-01 | 85.7% | 65.0% |
| 3866907 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 48.0 | 4.65e-01 | 84.4% | 78.8% |
| 3770804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 47.0 | 4.61e-01 | 84.4% | 78.8% |
| 3221547 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 5.00e-01 | 90.9% | 98.8% |
| 4675879 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.60 | 47.0 | 3.25e-01 | 85.7% | 24.5% |
| 3388630 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.60 | 50.0 | 4.97e-01 | 90.9% | 100.0% |
| 3513128 | 220.1.1.50 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 | 0.59 | 44.0 | 3.61e-01 | 80.5% | 84.0% |
| 3255902 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 49.0 | 4.89e-01 | 96.1% | 88.7% |
| 3258767 | 4.1.1.24 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e | 0.58 | 50.0 | 3.97e-01 | 92.2% | 56.7% |
| 3617677 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 46.0 | 4.62e-01 | 87.0% | 96.2% |
| 3941316 | 220.1.1.50 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 | 0.58 | 44.0 | 3.80e-01 | 83.1% | 95.2% |
| 3624441 | 4.1.1.24 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e | 0.58 | 50.0 | 4.01e-01 | 92.2% | 60.7% |
| 5021763 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.57 | 40.0 | 4.06e-01 | 72.7% | 98.7% |
| 3907176 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.57 | 44.0 | 4.23e-01 | 85.7% | 72.2% |
| 4643742 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 43.0 | 4.26e-01 | 84.4% | 78.8% |
| 4967553 | 244.2.1.11 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › DUF2283 | 0.56 | 33.0 | 3.67e-01 | 70.1% | 75.0% |
| 1507470 | 4.1.1.5 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e | 0.56 | 47.0 | 3.83e-01 | 90.9% | 61.2% |
| 3249603 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 44.0 | 4.50e-01 | 87.0% | 86.7% |
| 3471871 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 41.0 | 3.62e-01 | 83.1% | 91.1% |
| 3290519 | 220.1.1.116 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF6585 | 0.55 | 40.0 | 3.99e-01 | 77.9% | 93.8% |
| 2522075 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.54 | 38.0 | 3.46e-01 | 76.6% | 72.3% |
| 5074846 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.53 | 32.0 | 3.48e-01 | 71.4% | 75.0% |
| 3598207 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 39.0 | 3.41e-01 | 81.8% | 76.8% |
| 4508428 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.52 | 39.0 | 3.71e-01 | 85.7% | 66.3% |
| 3411789 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.51 | 38.0 | 3.28e-01 | 85.7% | 80.7% |