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SR-VP_0-2_scaffold_141_4953755_prodigal-single.1__X__X__00261
Bact-VirSR-VP_0-2_scaffold_141_4953755_prodigal-single.1__X__X__00261
Identity
- Kingdom:
- phage
Quality
83.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 356-440_477-675
Domain cluster:
rep: aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00112__D438-482_516-700
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1auqA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.80 | 54.0 | 6.37e-01 | 75.0% | 93.3% |
| 7xlqD02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.79 | 51.0 | 6.26e-01 | 71.5% | 97.4% |
| 1atzB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.78 | 52.0 | 6.31e-01 | 71.5% | 100.0% |
| 4wfqA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.77 | 52.0 | 6.28e-01 | 71.1% | 99.5% |
| 3zl8A03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.74 | 31.0 | 4.36e-01 | 88.4% | 78.4% |
| 2iueA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.73 | 51.0 | 5.87e-01 | 70.1% | 99.1% |
| 4dgfA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.71 | 33.0 | 4.90e-01 | 79.6% | 99.2% |
| 3fcsB03 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.70 | 49.0 | 5.28e-01 | 70.1% | 100.0% |
| 1e8cB03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.68 | 30.0 | 4.12e-01 | 88.7% | 80.3% |
| 2amlB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.65 | 32.0 | 3.72e-01 | 70.1% | 62.9% |
| 4rxtA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 34.0 | 4.43e-01 | 76.1% | 91.8% |
| 1u04A03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.62 | 35.0 | 4.27e-01 | 77.1% | 85.4% |
| 2acvA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.59 | 41.0 | 4.26e-01 | 70.8% | 99.6% |
| 1npyA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 31.0 | 3.93e-01 | 74.6% | 84.6% |
| 4bjhB02 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.58 | 31.0 | 4.18e-01 | 76.1% | 100.0% |
| 3czqC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 43.0 | 4.32e-01 | 75.7% | 75.7% |
| 4rkcA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.57 | 36.0 | 3.90e-01 | 76.8% | 72.3% |
| 3eccA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 34.0 | 4.25e-01 | 73.9% | 100.0% |
| 4ccsA02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 26.0 | 3.86e-01 | 75.7% | 100.0% |
| 2b4qB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 40.0 | 4.29e-01 | 72.2% | 92.7% |
| 3fpfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 36.0 | 3.76e-01 | 82.4% | 67.8% |
| 3tzqB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 40.0 | 4.32e-01 | 73.6% | 95.0% |
| 2fpoC00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 33.0 | 4.01e-01 | 87.0% | 90.6% |
| 2z5lA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 39.0 | 3.31e-01 | 72.2% | 47.9% |
| 3ksuB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 38.0 | 4.32e-01 | 71.5% | 92.4% |
| 3ragB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.54 | 38.0 | 4.21e-01 | 70.1% | 98.7% |
| 1zjcA01 | 3.40.1830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Thermophilic metalloprotease-like › Thermophilic metalloprotease (M29) | 0.54 | 35.0 | 4.23e-01 | 74.6% | 98.9% |
| 4impA03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 39.0 | 4.08e-01 | 72.5% | 84.8% |
| 3ua3A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 32.0 | 3.87e-01 | 80.6% | 91.9% |
| 2aqhA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 38.0 | 3.95e-01 | 72.2% | 92.5% |
| 5cmlA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 42.0 | 4.54e-01 | 97.5% | 97.1% |
| 3do6A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 39.0 | 3.85e-01 | 77.1% | 96.1% |
| 2aeaA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 40.0 | 4.28e-01 | 83.5% | 91.0% |
| 3d3kA00 | 3.40.50.10260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › YjeF N-terminal domain | 0.52 | 35.0 | 3.86e-01 | 78.9% | 82.4% |
| 3tjlA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 40.0 | 3.55e-01 | 78.9% | 80.7% |
| 1ii7A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.51 | 39.0 | 4.21e-01 | 79.2% | 93.2% |
| 3n05A02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 30.0 | 3.55e-01 | 72.9% | 84.7% |
| 4e69A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 43.0 | 4.17e-01 | 88.4% | 91.3% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3242179 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.83 | 52.0 | 6.47e-01 | 71.5% | 96.8% |
| 3652682 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.83 | 52.0 | 5.97e-01 | 70.1% | 82.8% |
| 3625748 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.82 | 52.0 | 6.24e-01 | 71.1% | 90.5% |
| 5028967 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.81 | 53.0 | 6.45e-01 | 71.1% | 96.8% |
| 3659669 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.81 | 57.0 | 6.27e-01 | 70.4% | 86.8% |
| 3922583 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.81 | 51.0 | 6.39e-01 | 70.1% | 97.3% |
| 3661688 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.81 | 52.0 | 6.16e-01 | 70.1% | 89.7% |
| 3993940 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.81 | 52.0 | 5.94e-01 | 70.4% | 84.2% |
| 4969295 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.81 | 53.0 | 6.54e-01 | 70.1% | 98.9% |
| 5051475 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.81 | 60.0 | 6.80e-01 | 82.7% | 97.2% |
| 3626685 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.81 | 52.0 | 6.47e-01 | 73.2% | 99.5% |
| 5004192 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.81 | 57.0 | 6.53e-01 | 81.0% | 94.4% |
| 3999802 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.81 | 53.0 | 6.50e-01 | 71.8% | 98.9% |
| 3531630 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.80 | 53.0 | 6.44e-01 | 70.1% | 97.4% |
| 4986567 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.80 | 58.0 | 6.78e-01 | 78.5% | 99.5% |
| 3602816 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.80 | 55.0 | 6.16e-01 | 79.9% | 86.5% |
| 3557980 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.80 | 54.0 | 6.48e-01 | 71.5% | 98.5% |
| 3270858 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.80 | 51.0 | 6.36e-01 | 70.1% | 98.9% |
| 4936416 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.80 | 57.0 | 6.23e-01 | 72.9% | 97.9% |
| 3796946 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 52.0 | 6.19e-01 | 71.5% | 93.0% |
| 5062313 | 2006.1.6.45 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 | 0.79 | 56.0 | 6.62e-01 | 85.6% | 99.5% |
| 4031918 | 2006.1.6.20 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › CobT_C | 0.79 | 68.0 | 7.04e-01 | 89.1% | 100.0% |
| 3940941 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 56.0 | 3.33e-01 | 80.6% | 11.4% |
| 4948073 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.78 | 61.0 | 6.30e-01 | 80.3% | 99.3% |
| 3530109 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 52.0 | 5.88e-01 | 72.5% | 86.4% |
| 3440234 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 54.0 | 5.97e-01 | 72.5% | 85.1% |
| 3882595 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 58.0 | 6.39e-01 | 76.4% | 100.0% |
| None | — | 0.77 | 54.0 | 6.10e-01 | 71.1% | 90.5% | |
| 5011082 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.77 | 55.0 | 6.40e-01 | 85.9% | 99.0% |
| 3932766 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 54.0 | 6.37e-01 | 77.1% | 99.5% |
| 4092963 | 2006.1.6.38 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 | 0.77 | 53.0 | 6.34e-01 | 75.7% | 99.5% |
| 3263364 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.77 | 51.0 | 5.77e-01 | 70.1% | 85.9% |
| 5001772 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 73.0 | 7.16e-01 | 100.0% | 100.0% |
| 3923160 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 50.0 | 5.92e-01 | 73.9% | 93.0% |
| 4125235 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 72.0 | 7.16e-01 | 98.6% | 100.0% |
| 4927526 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 61.0 | 6.68e-01 | 87.0% | 100.0% |
| 3266779 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.75 | 52.0 | 5.56e-01 | 71.5% | 79.6% |
| 4027796 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 51.0 | 5.97e-01 | 71.1% | 94.1% |
| 3191387 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.75 | 52.0 | 5.02e-01 | 70.1% | 73.8% |
| 4128742 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.75 | 50.0 | 5.86e-01 | 82.7% | 91.0% |
| 4062717 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 63.0 | 6.13e-01 | 87.7% | 96.5% |
| 3389620 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.74 | 53.0 | 6.09e-01 | 73.2% | 95.3% |
| 4937052 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.74 | 58.0 | 6.15e-01 | 79.6% | 100.0% |
| 3262787 | 2006.1.6.14 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › vWA-TerF-like | 0.73 | 50.0 | 5.90e-01 | 71.5% | 96.5% |
| 3789555 | 2006.1.6.51 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF29444 | 0.73 | 51.0 | 6.06e-01 | 71.1% | 99.5% |
| 3272950 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.73 | 53.0 | 5.41e-01 | 73.6% | 75.7% |
| 4989224 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.73 | 59.0 | 6.15e-01 | 82.7% | 100.0% |
| 5062145 | 11.1.1.1411 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VWA_3 | 0.72 | 52.0 | 5.33e-01 | 72.5% | 77.5% |
| 3747202 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 53.0 | 4.56e-01 | 77.1% | 50.7% |
| 3255134 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.72 | 51.0 | 5.77e-01 | 71.1% | 95.0% |
| 3265260 | 2006.1.6.41 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › vWA_SIBA-E | 0.72 | 48.0 | 5.64e-01 | 71.5% | 92.7% |
| 3550568 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.72 | 53.0 | 5.85e-01 | 74.6% | 91.5% |
| 5039355 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.72 | 51.0 | 5.76e-01 | 71.8% | 92.0% |
| 3242671 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 50.0 | 5.65e-01 | 70.1% | 92.1% |
| 3927338 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.71 | 49.0 | 4.36e-01 | 70.1% | 50.9% |
| 3934768 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.70 | 48.0 | 5.60e-01 | 70.1% | 94.3% |
| 3667603 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.69 | 46.0 | 5.63e-01 | 71.1% | 100.0% |
| 3211856 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.68 | 49.0 | 5.62e-01 | 77.5% | 97.2% |
| 3238254 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.66 | 52.0 | 4.80e-01 | 80.6% | 77.2% |
| 4674560 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.63 | 32.0 | 4.53e-01 | 89.8% | 100.0% |
| 4101425 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.62 | 37.0 | 4.31e-01 | 70.8% | 79.0% |
| 3267879 | 2003.4.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes | 0.62 | 28.0 | 4.04e-01 | 77.8% | 90.0% |
| 5053468 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 39.0 | 4.71e-01 | 76.8% | 97.9% |
| 4965137 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 27.0 | 3.82e-01 | 75.7% | 87.4% |
| 4312546 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.59 | 38.0 | 4.43e-01 | 74.6% | 90.0% |
| 3977807 | 2002.5.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › EAL domain › EAL domain › EAL | 0.58 | 37.0 | 4.58e-01 | 99.6% | 98.9% |
| 5043453 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.57 | 35.0 | 4.28e-01 | 71.1% | 96.0% |
| 3965613 | 2004.1.1.209 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activ_2 | 0.56 | 30.0 | 4.06e-01 | 72.2% | 99.3% |
| 3494898 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.56 | 33.0 | 3.68e-01 | 76.8% | 72.3% |
| 4257464 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.55 | 32.0 | 3.98e-01 | 93.7% | 90.6% |
| 1395085 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.55 | 38.0 | 4.23e-01 | 70.1% | 98.3% |
| 3207465 | 2003.1.5.114 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_34 | 0.51 | 42.0 | 4.13e-01 | 87.0% | 94.0% |
| 4458555 | 2003.1.7.2 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › IF-2B | 0.51 | 38.0 | 4.10e-01 | 76.1% | 91.0% |
D2
medium
residues 1-90
Domain cluster:
rep: OV696614.1__CAH1234442.1__CYRAN_47__00047__D3-81
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gkxA01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.61 | 42.0 | 3.59e-01 | 84.4% | 42.4% |
| 3i0zA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.60 | 43.0 | 3.47e-01 | 75.6% | 72.2% |
| 2vg0A00 | 3.40.1180.10 | Alpha Beta › 3-Layer(aba) Sandwich › Undecaprenyl pyrophosphate synthetase › Decaprenyl diphosphate synthase-like | 0.58 | 46.0 | 3.48e-01 | 85.6% | 91.6% |
| 1wtyA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.58 | 45.0 | 4.20e-01 | 84.4% | 98.3% |
| 1mabA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 42.0 | 2.99e-01 | 82.2% | 81.5% |
| 1y8oA02 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.54 | 43.0 | 3.52e-01 | 91.1% | 45.9% |
| 2xblD00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.53 | 44.0 | 3.44e-01 | 91.1% | 94.4% |
| 1sb7A02 | 3.30.2340.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, insertion domain | 0.53 | 42.0 | 3.69e-01 | 86.7% | 87.5% |
| 6dvsA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 44.0 | 3.34e-01 | 91.1% | 68.6% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.52 | 45.0 | 4.00e-01 | 95.6% | 70.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3928509 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.71 | 53.0 | 3.64e-01 | 78.9% | 28.0% |
| 5054258 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.68 | 60.0 | 5.17e-01 | 100.0% | 78.6% |
| 4989311 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.66 | 58.0 | 4.90e-01 | 100.0% | 71.6% |
| 4169550 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.60 | 43.0 | 3.71e-01 | 74.4% | 84.8% |
| 3736785 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.59 | 46.0 | 3.56e-01 | 84.4% | 73.3% |
| 4254871 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.59 | 47.0 | 3.42e-01 | 87.8% | 50.2% |
| 3791076 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.58 | 44.0 | 3.44e-01 | 82.2% | 80.5% |
| 4134799 | 7534.1.1.1 ↗ | a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf | 0.57 | 43.0 | 3.15e-01 | 81.1% | 82.8% |
| 4558649 | 3105.1.1.2 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › DUF5130 | 0.56 | 41.0 | 3.64e-01 | 78.9% | 84.1% |
| 3932753 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.56 | 50.0 | 3.49e-01 | 100.0% | 80.7% |
| 3971474 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.55 | 42.0 | 3.60e-01 | 80.0% | 63.6% |
| 4306177 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.54 | 42.0 | 2.73e-01 | 82.2% | 24.8% |
| 3702045 | 7585.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins | 0.52 | 37.0 | 3.57e-01 | 74.4% | 95.2% |
| 5075849 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.52 | 42.0 | 3.31e-01 | 91.1% | 91.7% |
| 5064569 | 2484.1.1.124 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 | 0.52 | 46.0 | 3.73e-01 | 100.0% | 65.7% |
| 3197471 | 603.1.1.179 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TPR_VPS8_2 | 0.51 | 46.0 | 3.48e-01 | 100.0% | 67.9% |
D3
medium
residues 91-129_150-301_325-355
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wocA00 | 1.10.4080.10 | Mainly Alpha › Orthogonal Bundle › ADP-ribosylglycohydrolase fold › ADP-ribosylation/Crystallin J1 | 0.51 | 38.0 | 3.52e-01 | 75.7% | 75.3% |
D4
medium
residues 442-474
Domain cluster:
representative
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942593 | 2006.1.6.20 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › CobT_C | 0.91 | 79.0 | 4.50e-01 | 100.0% | 10.8% |
| 4059478 | 2006.1.6.20 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › CobT_C | 0.90 | 79.0 | 4.52e-01 | 100.0% | 12.1% |
| 3861586 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.82 | 71.0 | 4.12e-01 | 100.0% | 11.2% |
| 3212283 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.82 | 69.0 | 4.06e-01 | 100.0% | 12.2% |
| 5001772 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 61.0 | 3.60e-01 | 97.0% | 13.1% |
| 5004671 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.76 | 60.0 | 3.57e-01 | 100.0% | 13.7% |
| 4125235 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 60.0 | 3.53e-01 | 100.0% | 13.9% |
| 4062717 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.74 | 61.0 | 3.59e-01 | 100.0% | 14.2% |