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SR-VP_0-2_scaffold_141_4953755_prodigal-single.1__X__X__00269
Bact-VirSR-VP_0-2_scaffold_141_4953755_prodigal-single.1__X__X__00269
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-105
Domain cluster:
rep: hypothetical_protein_PGCG_00195__YP_008052513__Phaeocystis_globosa_virus__251749__D2-103
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12957.14 best | DUF3846 | 37.4 | 3.20e-09 | 97.1% | 71.8% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 37.0 | 4.61e-01 | 75.0% | 87.9% |
| 2cmgA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.55 | 26.0 | 3.57e-01 | 77.9% | 90.2% |
| 1w7cA03 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.72e-01 | 77.9% | 75.7% |
| 3g8zA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 39.0 | 3.73e-01 | 100.0% | 70.3% |
| 2gtlO02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 32.0 | 2.81e-01 | 70.2% | 41.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963678 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.68 | 35.0 | 4.36e-01 | 79.8% | 80.0% |
| 3993916 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.68 | 37.0 | 3.64e-01 | 71.2% | 50.0% |
| 3626375 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.66 | 41.0 | 4.80e-01 | 83.7% | 92.9% |
| 3930955 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.60 | 39.0 | 4.43e-01 | 79.8% | 90.7% |
| 1933323 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 40.0 | 2.77e-01 | 71.2% | 23.6% |
| 1153941 | 243.4.1.2 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DsbG_N | 0.59 | 41.0 | 4.30e-01 | 84.6% | 79.2% |
| 3687023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.00e-01 | 70.2% | 74.0% |
| 3981157 | 222.1.1.14 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MC_hydratase | 0.57 | 37.0 | 3.12e-01 | 82.7% | 41.8% |
| 3930954 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 39.0 | 4.22e-01 | 84.6% | 85.9% |
| 3896806 | 5.1.4.341 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd | 0.56 | 45.0 | 2.84e-01 | 85.6% | 17.1% |
| 4854909 | 5.1.4.267 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF28639 | 0.55 | 43.0 | 3.65e-01 | 84.6% | 52.3% |
| 3505900 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 40.0 | 4.02e-01 | 84.6% | 79.0% |
| 3223708 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.52 | 39.0 | 3.76e-01 | 91.3% | 69.2% |
| 1169103 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.52 | 40.0 | 2.68e-01 | 83.7% | 34.0% |
| 3732634 | 5.1.4.15 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RPE65 | 0.51 | 40.0 | 2.60e-01 | 84.6% | 19.2% |
| 133841 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.50 | 39.0 | 3.72e-01 | 100.0% | 69.8% |
| 3517508 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.50 | 34.0 | 3.58e-01 | 70.2% | 82.1% |