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SR-VP_0-2_scaffold_141_5191495_prodigal-single.1__X__X__00070

Bact-Vir

SR-VP_0-2_scaffold_141_5191495_prodigal-single.1__X__X__00070

Identity

Kingdom:
phage

Quality

83.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 31-238
PDB
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1gv9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 57.0 5.57e-01 100.0% 76.2%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.72 51.0 5.19e-01 100.0% 74.4%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.71 51.0 5.30e-01 100.0% 77.9%
2a6vB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.70 55.0 5.44e-01 100.0% 77.0%
2durB01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.69 56.0 5.45e-01 100.0% 77.3%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.68 45.0 4.55e-01 100.0% 66.3%
3gneB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.66 55.0 5.26e-01 100.0% 75.6%
4c1wA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 48.0 5.09e-01 100.0% 84.0%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.65 54.0 5.22e-01 100.0% 78.6%
1umzA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 49.0 4.47e-01 100.0% 61.0%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 54.0 5.21e-01 100.0% 80.0%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.64 48.0 4.77e-01 100.0% 73.4%
3kg8A01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 39.0 4.71e-01 85.6% 96.2%
3zpyB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 48.0 4.53e-01 100.0% 69.6%
3seeA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 40.0 4.02e-01 100.0% 66.4%
8a7dC01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 47.0 4.67e-01 100.0% 82.9%
2lrgA00 2.60.60.60 Mainly Beta › Sandwich › Lipoxygenase-1 › 0.52 26.0 3.26e-01 97.6% 75.4%
1tdqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 25.0 3.51e-01 100.0% 98.9%
8bxrA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 24.0 3.48e-01 97.6% 98.9%
5u8rA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 28.0 3.77e-01 100.0% 100.0%
7rpyA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 24.0 3.22e-01 80.3% 83.5%
4n68A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 25.0 3.43e-01 100.0% 92.9%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5019985 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.75 54.0 5.45e-01 100.0% 73.3%
3261868 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.74 46.0 4.97e-01 97.1% 71.7%
2448364 10.1.1.19 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like 0.72 55.0 5.56e-01 100.0% 77.4%
3785122 10.1.1.19 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like 0.71 54.0 5.45e-01 100.0% 77.6%
3787926 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.70 53.0 5.53e-01 100.0% 83.6%
3598116 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.69 57.0 5.37e-01 100.0% 72.7%
3849049 10.1.1.19 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like 0.69 56.0 5.25e-01 100.0% 69.4%
3708849 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.69 48.0 4.45e-01 100.0% 57.3%
3608754 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.68 48.0 4.71e-01 100.0% 66.7%
4019267 10.1.1.36 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Polysacc_lyase 0.67 54.0 5.11e-01 100.0% 71.7%
3607773 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.67 49.0 4.67e-01 100.0% 65.5%
3259000 10.1.1.45 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Bact_lectin 0.66 56.0 5.37e-01 100.0% 77.3%
4293129 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.66 54.0 5.10e-01 100.0% 71.2%
2325788 10.1.1.47 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Polysacc_lyase_14 0.66 55.0 5.25e-01 100.0% 75.3%
4596967 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 55.0 5.26e-01 100.0% 78.5%
3357481 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.65 56.0 4.02e-01 100.0% 33.3%
4214272 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.64 55.0 5.13e-01 100.0% 72.7%
3172062 10.1.1.19 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_leg-like 0.64 60.0 5.09e-01 100.0% 67.7%
3219455 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.63 35.0 4.35e-01 100.0% 87.2%
3458331 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.63 56.0 5.20e-01 100.0% 75.4%
3808158 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.62 56.0 5.33e-01 100.0% 81.6%
5009919 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 48.0 4.79e-01 100.0% 78.9%
3371084 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.62 57.0 5.12e-01 100.0% 72.9%
3806983 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.62 56.0 5.21e-01 100.0% 78.8%
3702844 10.1.1.56 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TS_C 0.61 46.0 4.28e-01 100.0% 63.1%
3447952 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.61 57.0 5.11e-01 100.0% 80.0%
3825032 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.61 57.0 5.14e-01 100.0% 77.1%
4869601 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.60 56.0 5.19e-01 100.0% 80.2%
3730088 10.1.1.73 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26113 0.60 51.0 4.68e-01 100.0% 70.5%
3809268 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.60 55.0 5.14e-01 100.0% 80.8%
3319973 10.1.1.2 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.60 54.0 4.89e-01 100.0% 72.5%
4927537 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 47.0 4.64e-01 98.1% 79.1%
5010985 10.1.1.117 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Thermopsin 0.58 54.0 4.79e-01 100.0% 78.6%
3718344 11.2.1.44 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_SHIP1-2_2nd 0.53 29.0 3.47e-01 70.7% 76.4%