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SR-VP_0-2_scaffold_141_5191495_prodigal-single.1__X__X__00118
Bact-VirSR-VP_0-2_scaffold_141_5191495_prodigal-single.1__X__X__00118
Identity
- Kingdom:
- phage
Quality
80.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-68
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6qm7J00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.66 | 49.0 | 3.39e-01 | 77.8% | 64.2% |
| 3hdtA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 45.0 | 3.32e-01 | 88.9% | 31.5% |
| 1zq9A02 | 1.10.8.480 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 42.0 | 3.69e-01 | 93.7% | 59.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3731023 | 3567.1.1.23 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › DUF2985 | 0.87 | 61.0 | 3.99e-01 | 73.0% | 23.0% |
| 3420489 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.72 | 51.0 | 4.94e-01 | 77.8% | 67.1% |
| 4959473 | 148.1.3.411 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › HAAS | 0.67 | 48.0 | 4.83e-01 | 79.4% | 72.3% |
| 3958128 | 3892.1.1.0 ↗ | alpha bundles › Transhydrogeanse domain II › Transhydrogeanse domain II › Transhydrogeanse domain II | 0.64 | 52.0 | 3.78e-01 | 90.5% | 70.6% |
| 3599690 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 55.0 | 3.09e-01 | 100.0% | 39.2% |
| 3504092 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.61 | 50.0 | 3.72e-01 | 88.9% | 87.1% |