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SR-VP_0-2_scaffold_141_5191495_prodigal-single.1__X__X__00251
Bact-VirSR-VP_0-2_scaffold_141_5191495_prodigal-single.1__X__X__00251
Identity
- Kingdom:
- phage
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-80
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1eqtA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 25.0 | 2.68e-01 | 84.9% | 43.3% |
| 3f4lA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 45.0 | 3.27e-01 | 97.3% | 97.8% |
| 4nzrM01 | 3.30.1370.200 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.52 | 38.0 | 3.59e-01 | 94.5% | 65.5% |
| 1xi7A00 | 4.10.40.20 | Few Secondary Structures › Irregular › Omega-AgatoxinV › | 0.51 | 26.0 | 3.04e-01 | 82.2% | 68.1% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 25.0 | 2.68e-01 | 86.3% | 47.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5017819 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.66 | 36.0 | 2.59e-01 | 93.2% | 19.5% |
| 5058023 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 46.0 | 3.49e-01 | 83.6% | 72.5% |
| 3733254 | 2004.1.1.294 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ELP6 | 0.59 | 46.0 | 3.10e-01 | 89.0% | 79.7% |
| 4658076 | 109.4.1.906 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › N-HEAT_ATR | 0.55 | 43.0 | 3.09e-01 | 86.3% | 56.4% |
| 3404153 | 210.2.1.0 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain | 0.54 | 44.0 | 2.87e-01 | 90.4% | 66.8% |
| 3520913 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.53 | 45.0 | 2.69e-01 | 94.5% | 40.5% |
| 5076798 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.53 | 43.0 | 2.64e-01 | 87.7% | 46.7% |
| 3284000 | 4107.1.1.2 ↗ | alpha arrays › Jann2411-like › Jann2411-like › Jann2411-like › zf-CGNR | 0.53 | 40.0 | 3.01e-01 | 79.5% | 59.6% |
| 3722860 | 2004.1.1.463 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin, Kinesin_assoc, Microtub_bd | 0.51 | 41.0 | 2.62e-01 | 93.2% | 52.6% |
| 1700100 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.51 | 27.0 | 2.87e-01 | 90.4% | 55.7% |
| 5044400 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.51 | 38.0 | 2.39e-01 | 82.2% | 93.2% |
| 3587935 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.50 | 39.0 | 2.67e-01 | 90.4% | 63.9% |
| 3720823 | 109.4.1.1255 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N, Cnd1 | 0.50 | 43.0 | 2.46e-01 | 93.2% | 14.5% |